ET8162

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET8162

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 900094 [Map]; Strand: c
- AT5G03555.1 - [+] show detail - permease, cytosine/purines, uracil, thiamine, allantoin family protein
  Distance: 0; Region: exon1 (CDS)

GTTGATAGAG TTTAGCTTTT GTGCGAGATC TTAAAGAAGA AAGAGAATGA 
CGATTGTGTT TGTGGGGATG GAGATTGAGA TGGAGACTAA GGCTTAAGCA 
ATTGGAGACC ATTGAGTCTT CTTTCTCACA CAGAAAAGAG AGAAAGAGAA 
AGAATTGTGA GATGGAAATT GTGTGGTGGT GTTCTGTTTA AGTTCTCTAA 
GAAACATGTG GTTGGACATG AACCATGTGT TTAGTGGATG TTTCGTCGCT 
ATCACATCTC ATTTTCTTTT ACTTAATACG GAAAAAACTT AAAATAAGAT 
TCGATTTCTT TCTTTTTTCA GCAAAAAAGA GTTT

3 prime edge [+] show sequence

Chromosome: 5; Position: 899971 [Map]; Strand: w
- AT5G03555.1 - [+] show detail - permease, cytosine/purines, uracil, thiamine, allantoin family protein
  Distance: 0; Region: exon1 (CDS)

CAAGCCACAA GAGTTCCTAC ACTTCTTGTG TGTCTACGTT CGACATTCAA 
CGCAAAAGTA GCAAACACTA TGAATTGGGC AAGCACAGCT TCAGTCCGAT 
CCTGCCTGGT GACAACTTGG TTTTGAGCCG ATCTGGTGTC ATCCGCCCAC 
GACTCTCAGC GATGACCGGC TCAGAAATTA ATGACCACGG GTACGACGAG 
TCCCAATTCG ACCCATCCCT CACGAATGAC GACTTGAAAC CGACAACTCC 
AAGCCAGAGA ACGTTTTCAT GGTTGGATAT GTCAAGTTTA TGGATCGGTC 
TCGTAGTTGG TGTGCCTACT TACTACCTCG CCGGGAGCCT AGTGGATCTT 
GGCATGGCGT GGTGGCAAGG GATCGCCACA GTTGTTACAG CCAATCTAAT 
ACTACTTGTG CCGCTGGTCC TCACCGCTCA GCCTGGCACT CTGTACGGAA 
TTTCCTTCCC TGTCCTTGCT AGATCATCAT TTGGTATCCG TGGAGCTCAC 
ATCCCGACTC TACTTAGAGC ATTAGTCGGT TGCGGATGGT ATGGTATCGA 
GACATGGATC GGAGGTGAAG CTATCTTCTT GCTCTTACCG GGTCATATTA 
AGAAGTCTGC TTTGTCTCAT ACACTACCTT GGCTCGGCAC T

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: ET8162 - 5-prime edge
```
GATTGTGTTG TGGGGATGGA
```

AT5G03555.1

Model type: Protein coding
Short Description: permease, cytosine/purines, uracil, thiamine, allantoin family protein
Computational Description: permease, cytosine/purines, uracil, thiamine, allantoin family protein; FUNCTIONS IN: nucleobase transmembrane transporter activity; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Permease, cytosine/purines, uracil, thiamine, allantoin (InterPro:IPR001248); Has 4949 Blast hits to 4943 proteins in 959 species: Archae - 81; Bacteria - 2901; Metazoa - 0; Fungi - 592; Plants - 52; Viruses - 0; Other Eukaryotes - 1323 (source: NCBI BLink).
Link: InterPro Scan - TAIR