ET8246

CSHL Arabidopsis genetrap mutant lines

Original: ET8246

Phenotypes

Morphological phenotypes

Original description

  • dwarf mutant
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: ET8246

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25124360 [Map]; Strand: w
      • AT1G67150.1 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: 0; Region: exon3 (CDS)
      • AT1G67150.3 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: 0; Region: exon4 (CDS)
      • AT1G67150.2 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET8246 - 3-prime edge 
    GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATC TTCAGCACCA 
    TGCTTGACCG CCCCACACCG TTTGTTAGCA CTCCTGTGGA TATATTCATC 
    AATCATATAC TATAACTTAG CCAAAAAAGA AAGAGAGATA ATGTGTTATA 
    ATGTTTGTAC CTGCTGAAGT GAGTATAGCC ACGTCTTCAT CTGAGGTAAT 
    AAGGAAATTC ATGAAATTTA TGTAATTTGT AGTAAAAGCA TTTTCAGGAT 
    CATGGCATTG CTCATATGCA ATGACATTTC TAAGGATGAT ATTAGAAGAT 
    TCATCGGCAG GAAAACTCGG CAATATTAAG CAACCTTCCT CGAATGATAC 
    ATTCAGTGAA TACTCACGCT TCACTACCTT GAAGTCCACT CCTACACTGT 
    ATAGA

AT1G67150.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT2G44930.1); Has 1000 Blast hits to 902 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1000; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G67150.2

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT2G44930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G67150.3

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT1G65985.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR