ET8269

CSHL Arabidopsis genetrap mutant lines

Original: ET8269

Phenotypes

Morphological phenotypes

Original description

  • dwarf mutant
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: ET8269

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET8269 - 3-prime edge 
    TTTTTTTTTT TTTTTTTTTT TTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13684604 [Map]; Strand: w
      • AT2G32235.1 - [+] show detail - unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; ...
        Distance: 0; Region: exon3 (5UTR)
      • AT2G32240.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium io...
        Distance: 0; Region: exon7 (3UTR)
    Flanking Genome Sequence: ET8269 - 5-prime edge 
    AACCCCCAAA AAAAACAAAT GAAGAAGGAG AGATCTTCAT TTCACATATG 
    AACATCATCA AGCCACACTT GAAAAAACGA GACTAATACT TTCTCCCAAG 
    AATTATACCG ATGATAACAG AGATCAGCGC CACTCCAGTG ACGATCTTCA 
    CTGTCATGAG ATGTGAAGTT GATGCTGTTT GAGTAGGAGT AGTAACATTG 
    CCCGAAGACG AAGAAGAAGA AAGAGATGCT TCTGGCTTCT TCTTGCTCTT 
    ACGTTTCGTT GGAGAAGAAA AGGATAAGTC AATGTCTCGA GATTTGACAC 
    CTACATCCAT TGCCTCCGTT TCCTGCAAGT TTGGTTTTTG ATTATAAGCA 
    AGTATGCGAT TGAGATTTTG ACAAACCATA ATGCAAGGTT TCTGTCTCTA 
    ATTTTATGGA TCTTATGTCA TTTTGTCCCT CTAGATGTTA TAATATATGC 
    ATTGCATGTC TGTTATCAGT CAATCAAAGT TCTGATGCAG AGATATTATG 
    ACTAACCTTA GTTTTAGCAT CTGCGAGCTG CACTTTCTGT TCAAGATCTT 
    TGACCATTGA TTCAAATTCA GTGACAGCCT TTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13684638 [Map]; Strand: w
      • AT2G32235.1 - [+] show detail - unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; ...
        Distance: 0; Region: exon3 (5UTR)
      • AT2G32240.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium io...
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: ET8269 - 5-prime edge 
    CTTCATTTCA GATATGAACA TCATCAAGCC ACACTGAGAA GACGAGACTA 
    ATACTTTCTC CCAAGAATTA TACCGATGAT AACAGAGATC AGCGCCACTC 
    CAGTGACGAT CTTCACTGTC ATGAGATGTG AAGTTGATGC TGTTTGAGTA 
    GGAGTAGTAA CATTGCCCGA AGACGAAGAA GAAGAAAGAG ATGCTTCTGG 
    CTTCTTCTTG CTCTTACGTT TCGTTGGAGA AGAAAAGGAT AAGTCAATGT 
    CTCGAGATTT GACACCTACA TCCATTGCCT CCGTTTCCTG CAAGTTTGGT 
    TTTTGATTAT AAGCAAGTAT GCGATTGAGA TTTTGACAAA CCATAATGCA 
    AGGTTTCTGT CTCTAATTTT ATGGATCTTA TGTCATTTTG TCCCTCTACA 
    TATGGACTGC

AT2G32235.1

Model type
Protein coding
Computational Description
unknown protein; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 11; Plants - 11; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G32240.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink).
Link
InterPro Scan - TAIR