ET8309

CSHL Arabidopsis genetrap mutant lines

Original: ET8309

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8309

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22449174 [Map]; Strand: c
      • AT1G60970.1 - [+] show detail - SNARE-like superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET8309 - 5-prime edge 
    CCTACTTTCT CCCTGTATAG ATACTATCGT CTTAAATCTT TAGTCATATA 
    AAAAATTTGA TTGAAGTTAC GCATGATTTT CAGATAATCA CTCATTAGGT 
    GTTAGACAAT TGTGGCTCCC TAATTGTACT ATATACACAA AAGAGATTGC 
    TACTGCTCAC TGATTCATGT TCTGTTACAT CT

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET8309 - 5-prime edge 
    CTTTTGGTGG GGGATTTGCA AAATCTCTTA ATCTTTATT

AT1G60970.1

Model type
Protein coding
Short Description
SNARE-like superfamily protein
Computational Description
SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: leaf whorl, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT3G09800.1); Has 621 Blast hits to 621 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 149; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).
Link
InterPro Scan - TAIR