ET8314

CSHL Arabidopsis genetrap mutant lines

Original: ET8314

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8314

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19609731 [Map]; Strand: c
      • AT5G48385.1 - [+] show detail - FRIGIDA-like protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET8314 - 5-prime edge 
    CCTGCTGTTT TAGTAAACTA GCTGCGTCTC TCTTCTTCTG AAGCCTTTCA 
    AGCGCCGCCT GGTCCTTAGC CTCAACAGCA GCCTTCTTAG TCTCCAACAG 
    TTCTTGAGCT TTCCTTGTTT TGGTTTCATA CTCTTTTTCT TGATCTTCAA 
    GCTCATGAAA CCTTCTCTTC AAAGACCTCT CAAGCCCATG AAAATGCTCC 
    TCAAGTTCCT TCCACTTCAG ATTAAGTGTT ACAGCACGCT GACTTTCAAG 
    TTCAGCAAAC GCCTTCTGAA GCTGCTGAAT CTTGGATGAT GTAGAGTCCA 
    TGAGTGAAGC AACTGACCGA GTATCCTCCA TCACAAAAGA GCCTAAATAA 
    AACGGAAATT TAAGTAATGA TTAAAAAGTC CCGAACAAAT AAAAACAAAC 
    ATGAGTACAA CGACATTAGA GGCCAGACAA AATATTGTTA CCAATTCAAA 
    CAAGTCCAAT CTCCAAGCTG CGAATAGAGA GCTCCACGAA ATCTCGATCC 
    TTGAACAACA AACAACTACA AAAAAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19609653 [Map]; Strand: c
      • AT5G48385.1 - [+] show detail - FRIGIDA-like protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET8314 - 5-prime edge 
    GCTGCCTTCT TTTTCTCCAA CAGTTCTTGA GCTTTCCTTG TTTTGGTTTC 
    ATACTCTTTT TCTTGAGCTT CAAGCTCATG AAACCTTCTC TTCAAAGACC 
    TCTCAAGCCC ATGAAATATG CTCCTCAAGT TCCTTTCTTT TGAGATTAAG 
    TGTTACAGCA CGCTGACTTT CAAGTTCAGC AAACGCCTTC TGAAGCTGCT 
    CCCTCTTGGA TGATGTACAG TCCATGACTG AAGCAACTGA CCGAGTATCC 
    TCCATCACAA AAGAGCCTAA ATAAAACGGA AATTTAAGTT ATGATTAAAA 
    AGTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19609649 [Map]; Strand: c
      • AT5G48385.1 - [+] show detail - FRIGIDA-like protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET8314 - 5-prime edge 
    CCTTCTTTTT CTCCAACAGT TCTTGAGCTT TCCTTGTTTT GGTTTCATAC 
    TCTTTTTCTT GATCTTCAAG CTCCATGAAA CCTTCTGTTC AAAGACCTCT 
    CAAGCCCATT TTTT

AT5G48385.1

Model type
Protein coding
Short Description
FRIGIDA-like protein
Computational Description
FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Link
InterPro Scan - TAIR