ET8325

CSHL Arabidopsis genetrap mutant lines

Original: ET8325

Phenotypes

Morphological phenotypes

Original description

  • dwarf mutant
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: ET8325

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15706920 [Map]; Strand: c
      • AT4G32551.2 - [+] show detail - LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
        Distance: -561; Region: promoter
      • AT4G32551.1 - [+] show detail - LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
        Distance: -590; Region: promoter
    Flanking Genome Sequence: ET8325 - 3-prime edge 
    TTTAAACAAT TGAATTCGAG TAGTTATGAT TTTGATAAAA TGAAAAAGGA 
    CTGGCCCGTT CCCTCTATGA TCCTAAAAAT GGCATAAAAA TGAAAAAGGA 
    AATATGGATT TGATAAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15706802 [Map]; Strand: c
      • AT4G32551.2 - [+] show detail - LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
        Distance: -679; Region: promoter
      • AT4G32551.1 - [+] show detail - LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
        Distance: -708; Region: promoter
    Flanking Genome Sequence: ET8325 - 5-prime edge 
    CCTACTTTCT CCCTGTATAT CGGTCATTTT CCTATCATTT CATTAGTTTT 
    ATTAAATCGT TTAATTATTT ACAAAAATCC ATGTGACTTA AGTTCGTGAG 
    CTTAAAGTCT TTTTAGGCTA CTTTTGGAAA ACAATTGAGG TTTTCTAAAG 
    ATCCATACAA AAACAGAGTA ATTTAAGTTC TTAAAGCAAA AAATATGTGC 
    TTCTGTTTTT ACTAATCCAT CTTGAAAAGT CGTTTGATGT GAGGCCCAAC 
    ATTAAATCTC AGGTCCATAA GACCAAGGCC TTGCAT

AT4G32551.1

Model type
Protein coding
Short Description
LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
Curator Summary
LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.
Computational Description
LEUNIG (LUG); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G32551.2

Model type
Protein coding
Short Description
LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
Curator Summary
LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.
Computational Description
LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6).
Link
InterPro Scan - TAIR