ET8415

CSHL Arabidopsis genetrap mutant lines

Original: ET8415

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8415

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3877854 [Map]; Strand: c
      • AT1G11540.1 - [+] show detail - Sulfite exporter TauE/SafE family protein
        Distance: -699; Region: promoter
    Flanking Genome Sequence: ET8415 - 3-prime edge
    TTCAAGCTTA GTTGACATTT TGGTTCAAAG TAAGTTTACG AACCTCTTTA 
    ATTTATAGTG TGTAAGAAAA CGTACTATTT ATTTTATCCC ACCAGTATGT
    CATATTATTA TTTTTATACC CAAAAGTGAG GCAATCGTAA TAAAATGCAA
    GAAATTCAAA ATTGTCAATC AAAAATGAAT TGTTTTTCAA ATTAAAAATG
    CGATAAATAG TGTTCATCAC TTGGCACGTA AAAGGTTGAC TTTTAATATC
    GGAATGAATC CGGACATAAC ACATGTCCAA CTTGGCATAT TTAGCAAACT
    TGGACTATTT ATTAGAAGAT AGTGTTTATA GAAGAAATGT ACATTAAAAA
    ACGGTAAATC GCTAATCCTA GGCCTATCCT CACGATTGTG ATGTAATGTA
    ACCCACTTCC GTTGATTTCT TCAAAGAAAT CAAAAGTTGT GGGTTCTTCT
    AGAGATGCTA CTACTACAAC GATCGATGGA CGATTGTCAT TGATATGTTA
    TCGAATGGTA AATCGGACAA AAGTTTCTGG ATATGCTCTC TTATAATATC
    ACAATCACAA ATGCTATTTC TTTTCAATAA GGTATTTGGG CTTCATTAGT
    AGCTGTAGCT GAACCTTTTG TTTGTCACAT GTCTTTACTC TTATGCTCAT
    CCATGTTCGT TTATATTTTT GACCCAC
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 745969 [Map]; Strand: w
      • AT2G02680.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET8415 - 5-prime edge
    ATCGAAAAAC CATTATCAAT CCACAACGAA GAAACTTCCT CCGATGAAGA 
    AACCATTGAC TCCGGTGACA ACCTACCTCT TCCACTTCAT CTCTCTCGAC
    GAATTGTACG ACTCACCTCA ACAGTGATTA TTGACAATAT TACATTACAG
    GATGATCAAG GGAAGTCAGT AGAACACTTT TTCAATCTCA AGACATCCCC
    TTTCCATGGT GACAATACGT CAGTTGATCA TGATCCCGTA CTACCTCTGT
    TTTGGTGCAA CAATAAAGAA GCTGATCCAG AGAACGATTG CGTTATTTGC
    AAAGCCGAAA AGGTCGGCAC AGACTATTAT TACTGTGTCG AGTGTGATAT
    GAGGTACCAC AAAGAATGTG TCGAGTCTCC ACTTAGGATC AATTATCCTT
    CCCACGCCAA TCATTCTTTC CAACTTTACT CTTCCAAGAA AAGATTCAAG
    TATTGCATCA TGTGCAGAAA AAAAGTAAAC GGTCTCGTAT ATTATTGTGC
    TCTTTGTGAC ATGTATATGC ATACGCTTTG TGCCCAGGCG GTAATACCCT
    TTTTCATAGA CCAACCAAAA AGGCATGCCC ATATCCTCAC CCTTTTCCCA
    AGGCAAGCTT CCTTAACCTG CAATATTT

AT1G11540.1

Model type
Protein coding
Short Description
Sulfite exporter TauE/SafE family protein
Computational Description
Sulfite exporter TauE/SafE family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT1G61740.1); Has 3200 Blast hits to 2964 proteins in 743 species: Archae - 110; Bacteria - 1734; Metazoa - 0; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 1161 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02680.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, RanBP2-type (InterPro:IPR001876), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G02690.1); Has 1749 Blast hits to 685 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 10; Plants - 1682; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR