ET8422

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

stunted plants with sickly, roughened leaves

Anatomical entity /structure development stage	Phenotypes
sporophyte vegetative stage (PO:0007134)	abnormal (PATO:0000460)
vascular leaf (PO:0009025)	increased width (PATO:0000600)

Original: ET8422

Determination of insertion point(s)

3 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: ET8422 - 3-prime edge
```
GTACTTTTGT GGGCTTGCTT TTGGTGT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 7950629 [Map]; Strand: c
- AT4G13670.1 - [+] show detail - plastid transcriptionally active 5
  Distance: 0; Region: intron5 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATG 
TGTATGTATG TATTATCAAG TAGCCTAAAG CAGAGAAGCT CTTGTTCAAT 
GTTGTAGTTC ATGGAGTGGG TTGGTGAAGA TACGAAGTGT CCGTACTGTG 
AAGGTCTTGG CTATACAGTT TGCGATGTCT GCGACGGCAA AAAAAACTTA 
TAATAATGAT TCATATTTAA TTTAATGAAA AAACAAATTA GTTTGTTTTC 
CAAATCGCAT AATATGGTTG TTTAAGAGAG ATATATATAT AAATTTAGTG 
AACAAGTACG TATGTTAGTT TGTTTTTC

5 prime edge [+] show sequence

Chromosome: 4; Position: 7950495 [Map]; Strand: c
- AT4G13670.1 - [+] show detail - plastid transcriptionally active 5
  Distance: 0; Region: intron4 (CDS)

GTTCCATCGC ACTCTACATC AAGTTTTCAT TTTAAAATCA TCAAATAATG 
TGCTACAACT CAGTGCTTGA AGTGTTACTA AGGTTGGTTT CTATTAGCAG 
TCTCAATTTG CTAAGAAAAA TCATTCTTAA CTTTCAAAGA ACGGATGATT 
TTGACTTAAC CAGGGAGAAG GGATTTACCT AGGCACATCA ATCGACCCTC 
CCCTC

5 prime edge [+] show sequence

Chromosome: 4; Position: 7950572 [Map]; Strand: c
- AT4G13670.1 - [+] show detail - plastid transcriptionally active 5
  Distance: 0; Region: exon5 (CDS)

CTTTCTCCCT GCATACACAT AATCGGAGCG GGGTTATTTT GATTTTACTC 
ACCTGCGGCT CAATGTTTGG CTCACCGGTT CCATCGCACT CTACATCAAG 
TTTTCATTTT AAAATCATCA AATAATGTGC TACAACTCAG TGCTTGAAGT 
GTTACTAAGG TTGGTTTCTA TTAGCAGTCT CAATTTGCTA AGAAAAATCA 
TTCTTAACTT TCAAAGAACG GATGATTTTC ACTTAACCAG GGAGAAGGGA 
TTTACCTAGG CACATCAATC GACCCTCCCC TCGACAAGTG ATGCACCTCG 
TTTTGGTGTT TGTTGATTCA CCTNCTGTCT ACCAGTTTGT TCCTGCCAAT 
GAGCCTGGAG GGATCTTCCC ATCTGTTTTC TCCAAGAAGA AAAACCCGAT 
TTTGAGTAAC GTCAACTTCT CTGTCACTTT GATCTTTCAC GATTGATTGC 
TTCTCTCCAC GCGAATTATG TCACTGAAGT AAATACCGCC CCATTACCAG 
CTTCCTTAAT TAATGGAATT AAAAGAAAGA TCCAGTATAA AGAACCAGTC 
TTAACAGGTG TATTAAGCAA ATTAAGAGAA ATTTCAGAAT ATTCATGTTC 
CCTAAAACCT CAAACAAGAC AATGTAGTAT TTATCCCATT TACCAA

AT4G13670.1

Model type: Protein coding
Short Description: plastid transcriptionally active 5
Computational Description: plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
Link: InterPro Scan - TAIR