ET8510

CSHL Arabidopsis genetrap mutant lines

Original: ET8510

Phenotypes

Morphological phenotypes

Original description

  • stunted plants
Anatomical entity
/structure development stage		 Phenotypes
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)

Original: ET8510

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15316557 [Map]; Strand: w
      • AT5G38320.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
      • AT5G38320.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET8510 - 5-prime edge 
    CTTCGATTGG AATTATCTCA GGCCTGGGTA AACCGGTTTT ATATTTATCT 
    GTTTTACTAC GATATATGGG TTCCGGGATC TTTTTCATTT CTATAGGGAG 
    GATTTTGCCG TCGTTGAAGA ACTCTTCCGC GGACCAGGAG CTCTCGCCGG 
    AGATTGCACC GCGGGGTATT GAAAACTCCA AAGGAAAGCC CCAATAAAAG 
    TTGGAGATAT CATACGGAGA TTGTGATACA CGCTGCTCGA TTGGTATGGA 
    ATCGTGGTGG CAAAAATCGT TAGAAAATGA GATTCTTGGA GTTTCATTAG 
    CATTTTTGGG CATTGTTATT AATGTTCTCG AGAAAATATT AGAGGGTTTG 
    AAGAAAATGG TGATGGTAAA ACTCTTTTTT ATACGTGAAG ATTATGTATA 
    GGGGAATTAA ATGAAGGAGT GGTTATTTTC AAATGTTTGG TAAAGTTTGG 
    TTTATATTTG ATTTTCTATG TGAGGGACCA TTCTTGGTTG TGTTCTGTCT 
    TCGCAAATGG GCCTAACGTC TCTTGGGTTA ATGTTTTAGT TGATTGAGTT 
    TGGCCATCTT CTCTGTTTCT GATGTCTTCT TGCTCACATG ACTTTTGAAA 
    TCTCTTC

AT5G38320.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G38320.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, sepal, pedicel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR