ET8630

CSHL Arabidopsis genetrap mutant lines

Original: ET8630

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET8630

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20048697 [Map]; Strand: c
      • AT3G54140.1 - [+] show detail - peptide transporter 1
        Distance: -125; Region: promoter
    Flanking Genome Sequence: ET8630 - 5-prime edge
    GTCCTTCGAT ATTGATCTAT TTACACTTTG GAGTCAAAAC AAGATAATAT 
    CAAAATCCGA TAGCACAATA GGCCTTGCGG CTCTAACTGA AATATACAAA
    AACTCAAAGG GTTAAACTGC AAACATGAGA AGAAAAGTGA GCAACGCTCC
    TTTCTATTTC CTTGGATATA AAAGCTGTAC GGGACCAGAG CTCTGCAAGT
    CTTTTTTATA AGCTCATGCT CATTATTACT CCGACAAGTG CCGTGTAATT
    CCTCGCCCTC GGCTACTCTT TTCTTTTCTT GCCTCTCGTC TCCGCCGCTG
    ATTCAGCTGC CGCCGACAAA GGTTTCTCCC TTTTTTCTAA GTCTTTTATG
    AGTTTTCCTT TCGTTACAAG TTACAACCAT AACCTCATCT GGTCACACAT
    AAACTATAAT TTCAGAGCAT GAAAATTTCG TACTTGCTTG CTTCTTTCCC
    CTCGACCAAT CTAAGCATCT ACTAGTCAAT TTCTTTCACG TATATTTTTA
    AGGGTTTTCT CATAACCTTA TACCTGAAGT ATGGATCTCT AAATTGGGGA
    TCTTTAGGTA TGTGTTTGGT ACATCTTTCT TGAAAAAGCT AAACTATTTT
    TCTTTATTAG GAATATGGA

AT3G54140.1

Model type
Protein coding
Short Description
peptide transporter 1
Curator Summary
Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source
Computational Description
peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink).
Link
InterPro Scan - TAIR