ET8727

CSHL Arabidopsis genetrap mutant lines

Original: ET8727

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8727

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2253032 [Map]; Strand: w
      • AT1G07330.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET8727 - 3-prime edge
    TGAGGAACTG TTGACTCTTC ATGTATATAG AATCCTTTGT CTGAATTTTC 
    CAGTGGAAAG CGTCCGGATT TTGAGCTCTC TTCTTCCTCA GATCTTCCGT
    TCATCTCACT CCACTAAGAC AGACCCTCAA CTTGTTTGGC TACATAAGTT
    TCTGGAGAGA CCGTAGAAAT CGTTTGACCT AAATCTTTAT CAACTTTCTC
    CACTGGTAAC ATTTGAGTTT CTTCAGTTCT ATCCACAATG CTCTCCTCAC
    CACTAAATCC CGTCTCCTTC CCAATGTCTG ATACGTTGAC AATACGTGAT
    TTTTCTTCAT CAGAAGAATT ATTCCCATCA ACTGTAGTGG GAGGTGATCC
    AATTTCAGAA ACCTCAACTT GAAGATCAGA TTCTACAGAT AACTTATGAC
    CTTTTTTTGA GCTATAACCA AAATGCTCCA CGTATCTTTG CCTTTCCGCT
    GCTAAAGAAC TCGAAAGCGA ACCAGTGTTT CTAGGAACTA AACCAACTAA
    AGGGTTTTCA ACACGAAGAT CACCATTTCC TTTCCCAGAA GTTCCAGAAA
    AATATGCTTG ATTTGAGACA TCAGAATTCA TTTCCCTGTC TTCAGGA
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2253162 [Map]; Strand: w
      • AT1G07330.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: ET8727 - 5-prime edge
    TGAAGTTATT TCGAGAAGAG AAGAGGTTAT ATAGTTCTTG TTCATCTCAC 
    TCGA

AT1G07330.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1); Has 597 Blast hits to 536 proteins in 121 species: Archae - 2; Bacteria - 47; Metazoa - 170; Fungi - 43; Plants - 98; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink).
Link
InterPro Scan - TAIR