ET9041

CSHL Arabidopsis genetrap mutant lines

Original: ET9041

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET9041

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 890882 [Map]; Strand: w
      • AT2G03030.1 - [+] show detail - Toll-Interleukin-Resistance (TIR) domain family protein
        Distance: 362; Region: intergenic
      • AT2G03040.1 - [+] show detail - emp24/gp25L/p24 family/GOLD family protein
        Distance: 1941; Region: intergenic
    Flanking Genome Sequence: ET9041 - 3-prime edge 
    GTTTTCATCC CTAATAATAT ATTTTCCACA AACCATTTAT TCTCTAACGA 
    TTGTAACATT AAGTTTGTGT ATGCCATCTG AAACCATTTA TAGTGAGTGA 
    AGAAGGGTGG GTACATCACA ATAAATGGTT TGAGTAACAT TTATAGTAAG 
    TTTGAGTAAA TGGTTTGAGT AACATTTATA GTAAGTATGA TATAACACAA 
    ACTTAAAAAA AGCAAATGAG GAAGTTGGAT TTTGTTTTTT TATTGTAATA 
    TAATGTTTGT GGTACAGGGG AAACGGAGAA TGGTGATATA AGACCTTAAT 
    TAATTGATTA ATCTTGCAAC ATTTAGAGAA AATTAATGTA CCTTCAATAA 
    ATAAATAAAA AACACAACTA GAAAGGAGAG TCCATATCCA TACAAATTGC 
    AAAACATTTT CTTACGTCAC AACTTTTTGG TTCTGCTTTT CTTCATATAT 
    TGGAGACTCA CATTTGCAAT CCTTTCTCTT CTTTTTCCCA AAATGATTCT 
    CTTGTTCCTC AAGTCCAATC GTTGCTACAA CACACTGAAC CGCCTTAACA 
    ACTTCCTTGA TGAAATCTGC TTCATAACTG CCAAAAGAAG AATATATAAC 
    TTATTC

AT2G03030.1

Model type
Protein coding
Short Description
Toll-Interleukin-Resistance (TIR) domain family protein
Computational Description
Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT2G03300.1); Has 1604 Blast hits to 1539 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 1599; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03040.1

Model type
Protein coding
Short Description
emp24/gp25L/p24 family/GOLD family protein
Computational Description
emp24/gp25L/p24 family/GOLD family protein; INVOLVED IN: transport; LOCATED IN: integral to membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT2G03290.1); Has 637 Blast hits to 637 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 362; Fungi - 29; Plants - 206; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR