ET9050

CSHL Arabidopsis genetrap mutant lines

Original: ET9050

Phenotypes

Morphological phenotypes

Original description

  • stunted plants
Anatomical entity
/structure development stage		 Phenotypes
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)

Original: ET9050

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2222759 [Map]; Strand: c
      • AT3G07025.1 - [+] show detail - pre-tRNA
        Distance: 441; Region: intergenic
      • AT3G07030.1 - [+] show detail - Alba DNA/RNA-binding protein
        Distance: 242; Region: intergenic
    Flanking Genome Sequence: ET9050 - 5-prime edge 
    TGGGTAATAT CCATATCAAA GCCTAAGGGA GTTTTAGGAA GGGGGGTTCC 
    TTTTTGGTTT GTTCTCTTTA CCTTTCTTCT GCACAAATTT AGCTAAGTGC 
    AAAAATAATC TTTTGTTGCA TCTTGTAATT ATTTATGGGG GGTGGTTTGC 
    TTTTGTGTTT AGTATTTGTC CAAATTTCTC CGTATAACGT GTCAAAATAA 
    ATGGTTTTCT AAGGGAGAAA AGATTTACTG CAGATATTGG AAGGAGTAAA 
    AGAACAAAAA

AT3G07025.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Val (anticodon: TAC)
Link
InterPro Scan - TAIR

AT3G07030.1

Model type
Protein coding
Short Description
Alba DNA/RNA-binding protein
Computational Description
Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast hits to 441 proteins in 135 species: Archae - 3; Bacteria - 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).
Link
InterPro Scan - TAIR