ET9130

CSHL Arabidopsis genetrap mutant lines

Original: ET9130

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET9130

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23728591 [Map]; Strand: w
      • AT1G63930.1 - [+] show detail - from the Czech 'roh' meaning 'corner'
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET9130 - 3-prime edge 
    TTTCGCCGCC AACCAATTTC TCCCAACCGC CCACGACAAC AATTTGAGTT 
    GACCAATCGT GGCTCCTCCT TTACTCGCCG CCGATGATCC ACCGTTTCAA 
    CAACCAAACG ACCACAATCT CTCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23728942 [Map]; Strand: w
      • AT1G63930.1 - [+] show detail - from the Czech 'roh' meaning 'corner'
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET9130 - 5-prime edge 
    TGATTGGAAG AAGAAGGAGA AGAAAGGATC TGCTGGATTA ATGGAAAAAA 
    TGACAAGGAT GGAAAAGCTA GGCCACTCGT TGATGGAATT CCCAAATGGA 
    TTTCATTATC CGGCGGAAAA AGATGCTGCT GAATCTGCGG CGGCCCAAGT 
    GGCGGAAATG GCGGAAATAT GCAGGAAAAT GGAGGAGGAG CTTGTGCCGT 
    TACAGCAACA GATCAAAGAA GTTTTTCATA GGATCGTGAG GAGTCGTGCG 
    GAGATTCTCA AGGTGTTGGA GCAAGCCGGG AAAGTTTCGG CGCCAGTTGT 
    GTAAAAGTTT TGAATTATTG GGAATCAATT TCGAAGTTTT GTAATTCTTT 
    GGGGGCTAAT AGGATATTTT ATTTTCTTGG TTCCGCCTAT TGTGGTTTTT 
    CTATTTATGG TTGGGCTTTT AGAACTCTGG ACAGGCCCAT GCCATATGTT 
    TTCCCTTCTC CTTATATTTT TCATTTTCCA TTTTGTTAAA TTAATGCATA 
    ATATCCAAAA ACAATTTAAA TTTTTGAAGG AACCCTTTAG TTACGGCTCC 
    GAAGCTTTCA CAAGTGAGAA TGTGAGATCA AAGAAGGCAA ATGGAGGATT 
    TTAAAAGTTA AAATCATCTT TTATCTGCAA AAGTTGACAA TTTTTTTGTA 
    TCAAATC

AT1G63930.1

Model type
Protein coding
Short Description
from the Czech 'roh' meaning 'corner'
Computational Description
from the Czech 'roh' meaning 'corner' (ROH1); CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT4G23530.1); Has 150 Blast hits to 147 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 1; Plants - 145; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR