ET9274

CSHL Arabidopsis genetrap mutant lines

Original: ET9274

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET9274

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18019905 [Map]; Strand: c
      • AT3G48630.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1097; Region: intergenic
      • AT3G48640.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1745; Region: intergenic
    Flanking Genome Sequence: ET9274 - 3-prime edge 
    TAGGTCTAAA AGATCAATAC AGCCGGAATC AACCTCGCTG CGTATTTCCG 
    ACCCGCGAGT GCCAACATTA TACATCCACA AATTAAGGGT CCATGAATGG 
    TCAAACCATA CTTCACCAAA TCTGAATTCA CTACCAATTC AAGTAATACT 
    TATTATACCA ATTTGCATAA TAATTTCACA TAAAACCAAA TCTGGTACTT 
    TTACTATTAT TAGTAAAGAC TATGAAGCAA TCTAATTAGT GGTAATCTAG 
    TGAGGGCAAC ACTAAATCTT CAAAAAAACC AAAGTCAACC AAATCTATAC 
    TCTGAACAGA GATTAATAAA ATGTGATTTA ACTAAACTAA TTCGATTTAT 
    CAAATAAAAC AAAAAATTGA TAGAATATAC TTTATCTTTT CGTTAGAGGT 
    TCCAAGCCAC ACTCTCAAAA TGTGAACAGA ACTAAATCAT TTGAATCTCT 
    CATTCACTTC TCTACATAAA CCCCACTACA ATAATCACAA ATTCACAAGC 
    TACTTTCT

AT3G48630.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G48640.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66670.2); Has 42 Blast hits to 42 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR