ET9278

CSHL Arabidopsis genetrap mutant lines

Original: ET9278

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET9278

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21375143 [Map]; Strand: w
      • AT5G52710.1 - [+] show detail - Copper transport protein family
        Distance: -610; Region: promoter
    Flanking Genome Sequence: ET9278 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTACTTT CATTCTATTA 
    CAAGAAGTTT TTTTCAGAAG TTGCAATTTT TGATAAAGAT TTAGAGATAT 
    ATCCATGCAT TGATAAGTCA CAATGGATTT ACTAATGCAT AAATCCTCAT 
    GAGGTAAGTA TCACTAATCC AACAGTATTA ATCAACAGCA AAAAGATCGA 
    AGTAGACGTT GGGAACCACC TCCAACGGGC TGGGTAAAAT GCAACTTTGA 
    TAGCGGTTTT GTTCAAGGAA GAATGATTAC TATATCTCGA AAAATGATTA 
    TAATGATGCA ATCTGAAGGT TAAGAAAAAG GAAATAACTC AATGTCTCAA 
    TCTACTCACA ATTTGGATGA TCAAGTCGAT CTTAAGGTTA ACAAAAACAA 
    TAATACTCAA ATATGAAATA TGTAGTAAAC ACCACAACAG ATAAGGACAC 
    AAACTTTTAT TTTACAAGAT GAGATGAAAT TCTCGTCCAG AACAAACGAT 
    AGTCCAAAGA GCTCAACTGT CCTATAGGAA AATCCCATCC GATGAACATT 
    CGACACACGA TTCAGTACTT TTCGACTTAG ACAAGAGAAT CTATTAGATA 
    ATTTAATAGA ATCATCGGTC TTTCCTCGCG TTGTAGGTTA AGTTCCCTTT 
    CGTGTTGAAT GTTGGTTTCT TGAGGATCCA CCCGCTTTTG AGGTTTCATA 
    GGATGTCGTC TGACTGCTTG ATTTTGTGTA TTGAGAGGGA TTCAACGTAT 
    TG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21375240 [Map]; Strand: w
      • AT5G52710.1 - [+] show detail - Copper transport protein family
        Distance: -513; Region: promoter
    Flanking Genome Sequence: ET9278 - 5-prime edge 
    GACATACATA TTGCGATTAA ACAGTTCAAA GGTTAACTTA ATCGGGAATC 
    AAACCCTTAT GCACCTCCCT TAAAATTTCC CTTCAACTAT CCAATGTACA 
    AAACATATCG ATTTTTTAAT TCTCTGAATT TTATTATAAC AAATTGCATA 
    TTTTATTTCC TAGCCATATT GCAAGAAAAA GTGAGGTTCT TTCGTATTAT 
    CGAGATAAAT ACAAAAATAT ATCGCATCTT TAATTTATAT AATACGGTGT 
    TAGTTGAAGC CACTAAAGTC AGAGACCAGG CCACACTCTC TAACCATATA 
    TCATATAGAA AGACTAATCT AGACACAACT TGTTTTTATT CTACCATCTA 
    TTATATAGAA AGACTCAAAT TGTTCGTTGG TCTTGATGTA CATAAATTGA 
    CAATTTCCTA TTATAGTTCC AGTGGCTGGA CCTAATCATT TACTATATTC 
    ACTAGTTGCA AACAAAATAT CGTATACATA TAGAGGGAAG CAGAGGGTTA 
    TTTTGCAAGC TGCGAGGTTC CTGTCACATT CATTTACGTT ATCTCTCTTA 
    ACTCTTCACT CTCCAATGTC TAATCCTCAT TACAATCTGA AACACAG

AT5G52710.1

Model type
Protein coding
Short Description
Copper transport protein family
Computational Description
Copper transport protein family; BEST Arabidopsis thaliana protein match is: Copper transport protein family (TAIR:AT5G52680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR