ET9283

CSHL Arabidopsis genetrap mutant lines

Original: ET9283

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET9283

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14460904 [Map]; Strand: w
      • AT2G34240.1 - [+] show detail - Protein with domains of unknown function DUF627 and DUF632
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET9283 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATCTTG TATCACTACA 
    AGCTCCTCAC ACTTCATTCG CAGCGCTGAC GCATATGTGC TCCGCTGATT
    AACATTCTTC CTATTGTCTT CTCTGTTACA AATGGTTTCA GCCTCACCCA
    ACATCTTATC ATAGGTTACC ATTCTATGTC TCTTATCATA GTAGCTTTCC
    TTTTTCCTAA CCATGCCCCT TACTATTCTC AGAGCTGCTA ACCATATCTC
    AAAATTGTGT ACGCCCTCTC CCATTTGAGA CACAAGTTTC TCATCGATTT
    CTGGGCAGTC GACAACCCAG GAGACCATCT TGTCCCCCTC AGGTATCACA
    TGCTCATAAA TTCCACTGGA CTTAAAAGTC TCTACACTCC CTGTGTCATC
    AAAATGATGC TCTTCAT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14461049 [Map]; Strand: w
      • AT2G34240.1 - [+] show detail - Protein with domains of unknown function DUF627 and DUF632
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET9283 - 5-prime edge
    CTCCAAAATA TGAAGAATTA ACCGACAAAG AGTATATGGA GAGTATATCT 
    GGGCTATCTA CTGCTGTTCA AAATGACATT GTTATAAAAA GTCTGTGGAA
    GCTACGAAAA TTTCTGACAA AGAAGGTATG TATTCTTCGT CTTCGTTTCT
    TTCTACTCAT TATAACATGT TTTGACCTGT GGCTACTGAT AAAAATAAGA
    AATCTTGGGT ATTTTTTGCA GTTCCATTTG ATTGATTCAA AGATATTGCT
    GAACGAATTT ACACAAGGAG AGCTACATGA ATTCCCAAAG CTATCAGCAA
    TTGAGTATCG CATGGTGGTC CTTCCGTTTG TGAAAAAGTT TTTACAGGTT
    TATCAACTTA CGGAAATTAT CAATCACAGG GAACTCACTT GGTGTTTGTT
    ACTTAATTCC ACACAACACA

AT2G34240.1

Model type
Protein coding
Short Description
Protein with domains of unknown function DUF627 and DUF632
Computational Description
Protein with domains of unknown function DUF627 and DUF632; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF627 and DUF629) (TAIR:AT2G34220.1); Has 93 Blast hits to 93 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR