ET9966

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

stunted plants

Anatomical entity /structure development stage	Phenotypes
sporophyte vegetative stage (PO:0007134)	abnormal (PATO:0000460)

Original: ET9966

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 5026614 [Map]; Strand: w
- AT5G15480.1 - [+] show detail - C2H2-type zinc finger family protein
  Distance: 0; Region: exon1 (CDS)

TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAAAAT AGCTATGATT 
TGGGTTGTTT GCTCAACAAG AAACGAGAAA GGTGGTGAAT TGGAATCTGG 
GGTTTTAAGT TATGAGCAAA GACTTATGGA AGAAGGGTTT AGTAGTTATG 
GAGCATCGAA AGAACCAGCT AGCTTCTTGA GAGACGATAA CAGATTGGAT 
CAGCAGAAAC GGAGAAAAGA TGGTGAATTT GAATCCGGAC TTTTGAGTAA 
TGAGCAAAGA CTGCTAGAAG AAGAGATTAC TACTCCTGTG ACATTCAAAG 
GTCCAGCGAG TTCCTTGAGA CACAAGTGTG CTTTGGATCG AAATGGAGGT 
GAATTTGGTC CTGAGTTTTT GAGTAATGAG CAAACACTGA TGGAAGAAAC 
ATGGAAAGAA CCAGTGAGTT TCTTAGAAGA TAAGCATGAA TTTGATCAGC 
GGAAAATGCG AGAAGCTGGC GACTTTGAAT CTAGGTTTTA CAGAATTGAG 
CTTGGAGTAG GAGCTATGGA GTGTTCTTCT TCAGATACTG ATATGCTCAC 
GCAATCTGAT AAGAAGAACG TTGAGCATCG ATGCAGGTTG TGCAACAAGA 
TATTCTCGTC TTATCAAGCT CTAGGGGGTC ATCAGACGTT TCATCGGATG 
AGCAAATGTA AGAA

5 prime edge [+] show sequence

Chromosome: 5; Position: 5026719 [Map]; Strand: w
- AT5G15480.1 - [+] show detail - C2H2-type zinc finger family protein
  Distance: 0; Region: exon1 (CDS)

AACACGTACT GCCTCAGTAA GAATTTTCAG TCCGCCTACA ACCTTGGGAG 
CACTCTCAGA CAATAGAATC AAACAATCCG CCACTTCTAA TTCTTTAATT 
CGGACGACAA AAATAGAACT CGGTTCAAGA AACGTAGTAA ATGAAGTCTT 
CCCAGACCTA GCAAGTCTCG ATCTTTTCTT CTTCTTCACA AACTCAAGGC 
TACGAGACAG AGTCATCAAG GATTCTTCAC AAACCTTCTC GTTCGGCGAT 
AAATGCATCA TCGAGCGATG ATTCTTAAAA TATTTCTCGT ACCGAAACCC 
TTTTCCACAT TC

AT5G15480.1

Model type: Protein coding
Short Description: C2H2-type zinc finger family protein
Computational Description: C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G01030.1); Has 171 Blast hits to 168 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR