F00935

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
T1	rosette leaf (PO:0000014)	increased size (PATO:0000586) (Rosette leaf::Shape::large) abnormal (PATO:0000460) (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F00935

Determination of introduced cDNA(s)

RAFL06-73-K08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-73-K08 - Resource: pda03451

full reading [+] show sequence

AAAAAAAAGG AACGATCTTT CGAAAACAGA TAATGGTGAA AGCAGTGGTT 
GGAGAAGATA CTAGACTTAC TTCTGTTGAA GATCGTCTCT CTCACTCAGC 
TATTCCTGCT GAAGTGGGTC TTGTGATAGG GAAGCTTAGC TCTGTTCTGG 
ATCGTGGATT TGTCTTTGAT TTGATTCCTA CACCAAGTAA CGATGATGGT 
GAACCAGCAT GCGCGGTTTT GGAGACCAAA GATGATAAAA GGAAGCCTTC 
TAAGTCTAAA TCTCAGTCAT CTGAGTCGTC TTCTTTATCG ATTGATTCAG 
ATTGGGTTGC AGAACATGCT CGACAGGTAT CGAGAATGCT GTTGGGTGGC 
ATGAAGGTTG TTGGTATCTA TGTATGGGCT AGTGACATTG CTTTTAAGAA 
TTCTACTATG ATCCTTTGCC AGGCTATGAA GGCAGTTTCG GATGCAATAC 
GACATTTGGA TCCTAGCTTG AATGAAGCTC TTCTTATTCA CATATGTTAC 
AGTCCGAGGA GATGGAATTG CCGAACTTGT TTGCTGAGTT CAAGTATTAC 
ATCAAGTAAT CTTCGACCTT GTGACTTTAA GCTGGGAAAG GTGTTAAGTT 
CTCTACAGAG GTTTAGGTGC AGCTACAACT TTAGTTTCAG ATTACCAATT 
TACGGTGAGG GTGGGTCAAG TGCACAAACG TTTACTGATA CCATCCGTAA 
AGAACTTGCA ATTCATGCAA AGGAGCTAAA TAGTGCAAAT GCAATGATTG 
ATGGAGACTT GGTGCATAAC GACGAGCCTT GTAACACGGA TGGTGAACAT 
GAAATTGAAT TGTTATTCCC ATTCATGAAA GATACTCGTG CTGAGGCATC 
AACTGCAAAG AACGTTACTG GAATTCTACT CTTCACTGGT TCTGTATTCT 
CTTACGCCTA CTTGAACGTG AAAGAACCAG TTTCACAAGC TATTGCTGAT 
ATTAAGGCTG ACATTATTAG AAGTCTGCAA AGTAGATTGG ACATTATCTG 
TGATGAGTCC GAGCAGGATC TCAATCCAAC TGATGTGGGA GACAATGAAA 
ATGCAGACGG GATGTCGAAA ATTCCCATCT CCAAACTTAT CCTCAATTCA 
TCTATAAAAG CGTGCCATCT CCGTCTTCCC AGGAGAGTTC TTGTTCCGTG 
GCTGTCCGGT ATGTTCATCT GCGATTATCT ACAGCCGTTC GAATCACTCG 
AGGTGGTAAA AGAACGGTGT ATCGAGTTGA TGTCCATGGA ACATTCTTCT 
ATAGACGAAT CAAAGATTTC AGAAGTGGAA ACCGAAACGT CTTTATTGAT 
CGCGGAATCA ATGTGGGACG TGATATCTCC TGCGACATCT GCTTCCAGCT 
TCTGCCTAGG AGGGAATGTG GAAAGGACAA CGGATGGTGA AGACGAAACC 
AAGAGAACGA GTAACGCAAG TACTGCATCA AATGTCCCGA TTTTGGTCGG 
GATTTTCGTA CTTTTACTCT CAATTGTATT AGGATTCATG CTTTACCAGA 
GCGATTAGCT AATATCACAA GTGACAAGTC TCTGTTTTGA TCAAACCACA 
AATGAACTTA CTTTTGTTTC CCGCATTAGA GTAGAAGAGA GACTATTCTT 
CTCGTCGGAG AAAATATACA AAACCGTGCC TCTTTATATT TGAGGATACC 
TTCAATCAAT TTAGTACATT TTTTC

Gene models with high sequence identity

AT3G28670.1 [+] show detail - oxidoreductase, zinc-binding dehydrogenase family protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	ZINC BINDING DEHYDROGENASE-RELATED	2.1e-33
HMMPanther	Alcohol dehydrogenase superfamily, zinc-containing	2.1e-33
HMMPanther	ZINC BINDING DEHYDROGENASE-RELATED	7.9e-50
HMMPanther	Alcohol dehydrogenase superfamily, zinc-containing	7.9e-50

See the detailed result >

AT3G28670.1

Model type: Protein coding
Short Description: oxidoreductase, zinc-binding dehydrogenase family protein
Computational Description: oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); Has 151 Blast hits to 150 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR