F01942

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F01942

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F01942

Determination of introduced cDNA(s)

RAFL05-11-I11 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-11-I11 - Resource: pda02514

full reading [+] show sequence

AAAAACAGTA GAGAGAGAAA CCTTCTTCTT CTTTCTTCTT CTTCTACAAA 
ATTTCACAAA ACGAGAGAGA GGAGAGATTC AAACAAACGA ATCAACAGGT 
GAGAAATTCG AAATCTTTGC GAGCTCGTCT CGCCCAGAAT CTCGATTTCT 
CCACCTTTCC TCTTCAATTC ATCTTCCAAA TCCCTAAAAA AAAGACTCAA 
ACTTTTTAAT TTTGGTCCAA AAAAGACTCA AACTTTCTTC ATCAATGGCG 
GAGAAAATCA CGAGAGAGAC GTCGTTACCT AAAGAGAGAA GCAGCCCACA 
AGCTCTAATC CTGGGACGAT ACGAAATGGG TAAGCTTCTC GGCCATGGTA 
CCTTCGCTAA AGTTTACCTC GCACGTAACG TGAAAACAAA CGAAAGCGTA 
GCAATCAAAG TAATCGACAA GGAAAAAGTT CTCAAAGGAG GTTTAATCGC 
ACACATCAAA CGCGAGATCT CGATTCTTCG ACGTGTTCGT CACCCAAACA 
TCGTTCAGCT ATTCGAAGTC ATGGCGACGA AAGCTAAGAT CTATTTCGTG 
ATGGAGTATG TTCGTGGAGG TGAGTTATTC AATAAAGTAG CTAAAGGTCG 
TCTTAAAGAA GAAGTAGCTC GCAAATATTT CCAGCAATTG ATCTCTGCTG 
TTACTTTCTG TCACGCGAGA GGTGTTTATC ATAGAGATCT GAAACCTGAG 
AATCTTTTGT TAGATGAGAA TGGTAATCTT AAAGTCTCTG ACTTTGGACT 
TAGTGCTGTC TCTGATCAGA TTCGTCAAGA TGGGCTTTTT CATACGTTTT 
GTGGTACTCC TGCTTATGTT GCTCCTGAGG TTTTAGCTAG GAAAGGTTAT 
GATGCTGCTA AAGTTGATAT TTGGTCTTGT GGTGTTATCT TGTTTGTGTT 
GATGGCTGGT TATTTGCCGT TTCATGATCG GAATGTTATG GCTATGTATA 
AGAAGATTTA CAGAGGGGAG TTTAGGTGTC CTAGGTGGTT TTCTACTGAG 
CTTACCAGGT TGTTGTCGAA GCTTTTGGAG ACGAATCCGG AGAAACGGTT 
CACTTTCCCT GAGATTATGG AGAATTCTTG GTTTAAGAAA GGGTTTAAGC 
ATATTAAGTT TTATGTGGAG GATGATAAGT TGTGTAATGT TGTTGATGAT 
GATGAACTGG AGTCTGACTC GGTGGAGTCG GATAGAGATT CCGCGGCTTC 
TGAGTCGGAG ATTGAGTATT TGGAGCCTAG GAGGAGAGTT GGAGGGTTGC 
CTAGACCTGC GAGTTTGAAT GCTTTCGATA TTATATCGTT TTCGCAAGGT 
TTTGATTTAT CGGGTTTGTT TGATGACGAT GGGGAGGGTT CTAGGTTTGT 
TTCGGGAGCT CCGGTTTCGA AGATTATATC GAAGTTGGAA GAGATTGCTA 
AAGTTGTGAG CTTTACTGTG AGGAAGAAGG ATTGTAGGGT AAGTCTTGAA 
GGTTCAAGAC AAGGAGTGAA AGGTCCATTG ACGATTGCAG CAGAGATATT 
CGAATTGACA CCATCGTTGG TTGTTGTGGA AGTCAAGAAG AAAGGAGGAG 
ATAAAACAGA GTATGAAGAT TTCTGTAACA ATGAATTGAA ACCCAAGTTG 
CAAAACTTGA CAGCTGATGA TGTAGTAGCT GAGCCTGTCG CGGTTTCAGC 
GGTTGATGAA ACCGCTATCC CGAATTCTCC AACCATTTCT TTCTTGCCGT 
CTGACACTGA ATAGAAGGAC TTGATGGAAG ACCACAAAGC CAGAGATCAT 
GAGGGGTATG TATGTACACT GTATGTTTTG GGTTTTGTAA TCTGGATTGG 
GAAAGAAAAA AAGCTGCTTA CGGTTGGTGA AATTTAGAAT CGAATTATAT 
GTAATACTTA TGTTTCTGTT GGAGAGGATC GTTAGAGAAA TTGAGTTATG 
TTTTTTACTA ACCTTTTAGC AGTTTTTTTT TGTAATGGGA GAATTGTAAA 
CAGTTTCGCA TAATCAGATC TTTGATATGT ATAAAAACAA TGAAATAAAT 
AAAAGAAAGT TCCTTTCTTC TT

Gene models with high sequence identity

AT4G18700.1 [+] show detail - CBL-interacting protein kinase 12
E-value: 0; Score: 99.95

InterPro Scan Digest

Program	Description	E-value
HMMSmart	Serine/threonine-protein kinase domain	1.5e-109
HMMSmart	Tyrosine-protein kinase, catalytic domain	1.3e-13
ProfileScan	Protein kinase, catalytic domain	53.121
ProfileScan	NAF/FISL domain	14.526
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
HMMPanther	CBL-interacting protein kinase	2e-227
HMMPanther	Calcium/calmodulin-dependent protein kinase-like	2e-227
HMMPfam	Serine/threonine-protein kinase-like domain	3.6e-76
HMMPfam	NAF domain	1.6e-23
Gene3D	no description	1.8e-66
superfamily	Protein kinase-like domain	1.3e-94

See the detailed result >

AT4G18700.1

Model type: Protein coding
Short Description: CBL-interacting protein kinase 12
Curator Summary: Encodes CBL-interacting protein kinase 12 (CIPK12).
Computational Description: CBL-interacting protein kinase 12 (CIPK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 19 (TAIR:AT5G45810.1); Has 132740 Blast hits to 130588 proteins in 4556 species: Archae - 205; Bacteria - 15732; Metazoa - 48597; Fungi - 13262; Plants - 32355; Viruses - 523; Other Eukaryotes - 22066 (source: NCBI BLink).
Link: InterPro Scan - TAIR