F07232

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F07232

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)

Invisible phenotypes

Original: F07232

Determination of introduced cDNA(s)

  • RAFL04-10-E06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-10-E06 - Resource: pda00314

    full reading [+] show sequence

    Nucleotide sequence: RAFL04-10-E06 - full reading 
    AAACCACACA AGAGAAGGAG GAGGCAATGG CGGTGTTATC CACCATCTAC 
    TCCATCACCA GAGCTTCAAC GCCTACTATG GCGTCTCTAA CTAATGACTC 
    ACCGTCTCCA CTTCCTTCTT CTTCACCGTC GAAGCTTCCC TCTCCTACTT 
    CTCCGTCAAA GAAACCGTTA AAACTAAGAC AAGTGAGCAA ACAAATGGGA 
    AGTCAAAACC AGCAACGACG AGGCAACAAG CCTTCGATAG CACAGATTGA 
    GAGAGCTTTT GGCTCTGGAT CATATCGTGA TTCCGAAGGG GAAATGGATA 
    TGAATACGGT ATTCGATGAG CTTCTATTAG GCCATGCTAA TAAATTCGAA 
    AGTAAGATCG AGAAGAAGCT ACGGGAGATT GGCGAAATCT TTGTAGCTCG 
    AACAGAGCCT AAGCTTCGTT CCTCGGGGAA ACCAGTTTTG ATGTTTACAA 
    TTCAATGGAT TCTTCCAATA TGGATTATGT CACTGCTCGT AGCTTGTGGA 
    GTTATCAAAC TCCCTTTTAG CATCCCTTTC CTTGATGACT TGATCATGTG 
    ATTCTTCTAC ACAGTTAATA CACATGTACT CTTACCATAT TTCGTTAATA 
    ATACTTTTAG TGTATTAGTG TAATACCATA CCTCAAACAA ACTCATCACA 
    GATAAGTCTC TAGGGAAAGA ATGCTTGTTA TTGGTGAGAT ATACTTTTCA 
    GCTCACGGTG CACTCGATAT GGAAGGAACG GAATGGTCGT CGACATGGAG 
    AAGTACCTAT TCATATCTCC CAGTTAACTC GCGAACTCGA CAAGCAAACC 
    CGAAACAGAA TCTTTTCTAT TCGAGAGCTA GGTGATAGAA GATATGAAGA 
    TTCTATGGCA ATCTGGTTTG GTTCAAAATA ATCTAGACAT CTTCTTAATT 
    CTTGCTCAAA CACAAGCTGC ACTTGATGTA AAACAGTTTT TTTTTTCCGA 
    ATGATTTTAC ATAATATTCC AAAAAAAAAA AAAAAA

    Gene models with high sequence identity

    1. AT2G01590.1 [+] show detail - chlororespiratory reduction 3
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G01590.1

    Model type
    Protein coding
    Short Description
    chlororespiratory reduction 3
    Curator Summary
    Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.
    Computational Description
    CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR