F07851

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F07851

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F07851

Determination of introduced cDNA(s)

  • RAFL06-83-K12 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-83-K12 - Resource: pda03859

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-83-K12 - full reading
    GTCCTGTCTT GCAAGCAAAT TAAGATCATA AAAAGGTTTA GAGCTTTTCT 
    AACAAACGTC AAAGCAAATC ATCATCGGAG CAATCTTCAA ATCATCATGA
    TAACAGTAGC CATCGCAGCC GAGTTGCTTG AAGAATATAC GGCGGCGCTC
    ACACGCATCA CCGCCACACT CCTCCCTCCA CCACCTACAA GTCACCGTCG
    AAGTGTCCGA GCTCCTACTA GCGGCCGAGC TGACTCTTCC TTGCCTCGTA
    ACGATAACAA CTCATCATCA TGCGCTCCAA ATTACACCGC TTTTCTCTTA
    AATTTCTGAG TATTTTTTTA ATAGACGAAG AGATTTTCGA ATTTTCTTTG
    TCTTGACTGT AATAATGTTT GTGTTATTCA ATTGGAACTT TCTATTTATT
    TTCGATATTA TTTCATTGAT GTTTTTCTAC AGTAATCATT AGAAAACAAA
    AAAAAAAAAA AAA

    Gene models with high sequence identity

    1. AT5G24570.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G24570.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR