F08334

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F08334

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F08334

Determination of introduced cDNA(s)

  • RAFL06-10-B17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-10-B17 - Resource: pda02970

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-10-B17 - full reading 
    AAAGCTTGAA GTTCTTCTTC CTCATCGGAA AACAAACAAA GAATGATGAA 
    TATTTACGAC GATGAATCTC TGAAGCAAGA AGTAATCTAC CTTCACTCCC 
    TCTGGCATCA AGGTCCTCCT ACCCGAAAAC CAATCCCTAG CCCTAATTTC 
    AACCTGATTC ACGACCCGAT TCAACGACCC AGACCGAATT ACATCCCGCC 
    GTCTGATTTG CAACTTCTCT CTCGCTATGG AGCTGTTACT CCACAGATCA 
    TATCCAGAAA CCCTAATAAT CCTCAAAATC TCTACAATAA CAACAAACGT 
    CCTAGGCCTG ATTCGGGTCG AGAATGGCCC GTCAATGACG TGCCTCAGCC 
    TCCTTCTACG GGATCTGGAT GGCCGGAATA CAGGCCGTGT AAAAAGACTC 
    GACCTATTTC GGCCGAGGAG AAAGAGAAAT TGGCGGCGAA TATGCTTCAG 
    AGAGATATCC ATCGCACCTG TCGCGAGTTC TTCGGTCGAA AATCCGGTGA 
    AGAAGATAGC TCAGTCGCCG GAGGAGATGA ATCGGAAATC GATGAAGGAG 
    ACGAAGATCA GTCTTTGGAG AAAGAAGAAT CTTCTTCTTC CAAGGAGTTT 
    CAGTTTCTAT CGAGAGTTTT TGAAGAGAAT GTGAAGTTGA AGGAATACTA 
    TGAGAAGAAC ACTGGGAATG GAGAGTTTTG GTGTTTGGTT TGTGGTGGCA 
    TTGGAGAGAA AAGTTGTAGG AAGTTCAAGA GCTGCTTAGC TTTAATTCAG 
    CATTCACTTA CTATTCACAA GACGGATTTG AAAATTCAGC ATAGAGCTCT 
    CGCTCAAGTT GTCTGCAATG TTCTTGGCTG GGACGTTAAC AATCCAGTTG 
    TTTCTAGCCA AAAAGATTCT CAGACGGTTG TGGAAGGTGC ATCTGAGCCG 
    CCTTCAGACT CGAAGATTCC TCAGGAGAAA CAACAGGTCA TGTCGGTTGA 
    AGAACACGCA AAGGCTGCGG TGTTACAAAT GCAACAGAAT GCATCAGAAG 
    CTTTGAAAGA CATTTTTGTC AAGGATGGTA CTGGTGCAGC TGATGGAACT 
    GAGGAGAACG GTGATGAGAA TCTGTCTGAG GAGTTGGAGT TAATATCTAA 
    AGTCTTCTCC GAGAATGTTG AGCTCAAGAG TTACTATGAG AAAAACTATG 
    AAGGTGGAGC TTTTATCTGT CTGGTGTGTT GTGCTGCGAC TGATAAGAAG 
    ATGTTAAAAA GATTCAAACA CTGTTATGGA GTTGTTCAAC ATTGTACTAA 
    AGTACCAAAA ATGAAAATAC GAGCTCACAA GGTTTTCGCT CAGTTTGTCT 
    GTGAACTACT TGGCTGGGAT TTTGAGCTTC TACCACGTAG AGTAATGAAA 
    GGCGTTGCTT CTCTTGCTAT ATCTAATGCT AACGAGAACA ATGAGAACAC 
    ATCATCCATG GTCGAGGAAC ATATGTGCGA AGATAAAGCT GGTAACCCAC 
    AGGACAACAA TGAGGCTGAG GCATGCGTTG AGGCTTAATC ATATTGTTTC 
    TCTTCTACGT ATTCAATTGA AGAGTCAAAG ACTCAAGAGG CACAAAGTTA 
    TGTATATGGA AGGCACTAAA TCTTCAGGTA CTATTATTTA GTTTTCGGCA 
    TGTTATCAAA CTTCTCACGA CTTGGTAATG GAGTCATCAA TGACAATATG 
    TATTAGTGTA CTCAACTTTT GATTCTGAAT TTTGATTAGT TAAAAATATT 
    CTGTTCTTTT CTCACTGAGA ATTTTGGAGT ATTCAAATCA AAGTTTCCAT 
    ACTTTG

    Gene models with high sequence identity

    1. AT1G78810.1 [+] show detail - unknown protein; Has 75 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazo...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G78810.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 75 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR