F10331

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F10331

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F10331

Determination of introduced cDNA(s)

  • RAFL07-16-B09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL07-16-B09 - Resource: pda17342

    full reading [+] show sequence

    Nucleotide sequence: RAFL07-16-B09 - full reading 
    GAAAACTACC AAACCTACAG AAATCTCTCT TCTTCTTCTT CTCTACAAAA 
    TTTCAATGGA AGCTGTTCTT GTCGCAATGT CCGTCCCCGC CACAACGGAA 
    GACGACGGAT TTTCGTTAAT CACCGATAAA CTTTCATATA ATCTAACGCC 
    GACGTCGGAC GTTGAGATCG TTACCTCCGA TAACCGTCGG ATTCCGGCAC 
    ACTCCGGCGT TCTGGCTTCA GCTTCACCGG TACTGATGAA CATCATGAAG 
    AAACCGATGA GACGTTACAG AGGCTGTGGA TCTAAAAGAG TCATCAAGAT 
    TCTTGGCGTT CCATGCGACG CCGTTTCGGT TTTTATCAAA TTCCTCTACT 
    CTTCTAGTTT GACGGAGGAT GAGATGGAGA GATATGGAAT CCATCTTTTA 
    GCGTTGTCTC ACGTCTACAT GGTCACCCAG CTGAAGCAAC GGTGCTCAAA 
    AGGCGTTGTA CAACGTTTAA CTACAGAGAA CGTAGTCGAC GTCCTCCAGC 
    TAGCTCGGCT CTGCGACGCA CCCGATGTTT GCCTTCGATC TATGCGTCTG 
    ATCCATTCGC AGTTTAAGAC CGTTGAGCAG ACTGAAGGAT GGAAGTTTAT 
    TCAAGAACAT GATCCTTTCC TCGAGCTCGA CATTCTCCAG TTCATCGATG 
    ACGCCGAATC GAGGAAGAAA AGAAGGCGAC GACATAGAAA GGAGCAGGAT 
    CTTTACATGC AACTAAGCGA GGCAATGGAG TGCATAGAGC ACATATGCAC 
    ACAAGGTTGT ACATTGGTCG GTCCATCAAA CGTAGTAGAT AACAACAAAA 
    AGTCAATGAC TGCGGAAAAG TCAGAGCCTT GTAAGGCGTT TTCCACGTGT 
    TATGGTCTTC AGCTTTTGAT ACGTCACTTT GCCGTATGCA AGAGGAGGAA 
    TAACGATAAG GGTTGTCTTC GTTGCAAGCG GATGCTTCAA CTCTTTAGAC 
    TCCATTCTTT GATTTGTGAT CAACCCGATT CTTGTCGCGT CCCTCTCTGC 
    AGGCAATTTA GGAAACGGGG AGAACAAGAC AAGAAAATGG GTGAAGACAC 
    CAAGTGGAAG CTTCTGGTGA CAAGGGTTGT GTCTGCAAAA GCTATGACGT 
    CGTTGTGTCA GTCAAAGAAG AACAAATGTG AACAAGCACA AGGGGTTTAA 
    TCAAAACCAG GAAGGAGTTA GTTAGGTTTG AAGAAGATTA AGTAAGAAGC 
    TTTCTTATAA TTTGATATCC ATTCTTTTTG TAGTATAATA GTATTTGTTA 
    GTTCGATTCT TTATTAGAGG GGTTTAGTTT GTATAGGAGT AAACCCTTTT 
    AAATTGGCTG TATAAGTAGG TCATATTCAA TTGTTTTGTT CTATTTATCT 
    GAAAAATGTC AGCATGTAAT ACAAAACAAA AA

    Gene models with high sequence identity

    1. AT3G48360.1 [+] show detail - BTB and TAZ domain protein 2
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Zinc finger, TAZ-type 2.6e-20
    superfamily BTB/POZ fold 2e-11
    ProfileScan BTB/POZ-like 11.544
    HMMPfam BTB/POZ 4.7e-11
    HMMPfam Zinc finger, TAZ-type 1.8e-07
    HMMPanther Kelch related 2.4e-14
    Gene3D BTB/POZ fold 2.8e-06
    Gene3D Zinc finger, TAZ-type 1.3e-13
    HMMSmart BTB/POZ-like 1.9e-08
    HMMSmart Zinc finger, TAZ-type 1.1e-11

    See the detailed result >

    AT3G48360.1

    Model type
    Protein coding
    Short Description
    BTB and TAZ domain protein 2
    Curator Summary
    encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development. BT2 also mediates multiple responses to nutrients, stresses, and hormones.
    Computational Description
    BTB and TAZ domain protein 2 (BT2); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 1 (TAIR:AT5G63160.1); Has 1199 Blast hits to 1199 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 703; Fungi - 0; Plants - 445; Viruses - 2; Other Eukaryotes - 49 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR