F10345

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F10345

Determination of introduced cDNA(s)

RAFL02-10-H10 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL02-10-H10 - Resource: pda00040

full reading [+] show sequence

AGGGTTTTGA AGAGTCTCTC GTCGCCGTTT GTAATTCCTC TGTGAGCAAA 
TCGACAAAAT GGGTCACTCT AATGTCTGGA ACTCTCATCC GAAGAAGTAC 
GGTCCTGGAT CTCGTTTATG CCGTGTGTGC GGGAACTCAC ACGGGCTTAT 
CAGGAAGTAT GGTTTGAATT GCTGCAGACA GTGTTTCCGC AGTAACGCCA 
AGGAGATCGG ATTCATTAAG TACCGTTAAA GAGGCCTTTG ACTGATGCTT 
ATAATACACA AACATGTTGG TGTTGATGAA TTGGCCTTGA ATCTTTTAAG 
TTGTTGTTGC ATTCTTCTTT AAAGTTTATC TCTTATTTGG AACAATGATC 
TTTTGGTTTT GATTAATATT TTGCTTGTT

Gene models with high sequence identity

AT3G43980.1 [+] show detail - Ribosomal protein S14p/S29e family protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Ribosomal protein S14	5.4e-19
HMMPanther	SUBFAMILY NOT NAMED	1.4e-38
HMMPanther	FAMILY NOT NAMED	1.4e-38

See the detailed result >

AT3G43980.1

Model type: Protein coding
Short Description: Ribosomal protein S14p/S29e family protein
Computational Description: Ribosomal protein S14p/S29e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209); BEST Arabidopsis thaliana protein match is: Ribosomal protein S14p/S29e family protein (TAIR:AT4G33865.1); Has 986 Blast hits to 986 proteins in 355 species: Archae - 225; Bacteria - 0; Metazoa - 331; Fungi - 136; Plants - 156; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
Link: InterPro Scan - TAIR