F10642

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F10642

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F10642

Determination of introduced cDNA(s)

  • RAFL06-07-F18 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-07-F18 - Resource: pda07501

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-07-F18 - full reading 
    AACATTCTCA GAGAAGCCGT CTTCTTCCTC CTTCAATCTC TCTCGTTCGT 
    ATCATCTGCT CTGCGATTTC AATGGCGAGC CGTTGGTTGA GACCTGAGGT 
    GTATCCTTTG TTCGCTGCTA CCGGAGTTGC CGTTGGGATC TGTGCGTTTT 
    CCTTGATCAG AAACATCACC GGAAACCCTG AAGTCAGATG CACCAAGGAG 
    AACAGGGCTG CTGGAATTTT GGATAACCAT GCAGAGGGAG AGAAGTATAA 
    GGAAAATTTC CTGAGGAAGT TTGTTCGCAA CAAGAAACCT GAAATCATGC 
    CTGGACTCAA CAAGTTCTTC ACTGATCCTA CATACTGAAA CCATCTTTGC 
    ACACCGCTTT GTCGTATTGT TTCTGGAATT GAATCTCTTT GTGATATAAA 
    ACCGCATTTG TCAATTTCAC ATTGTTGATG TATCCTCCAG CTGAAGACAC 
    TTGTTAATGC TGGGCTTATG TTGTCACTTT TAAGCAGAAA ATTGTATGAC 
    TTGCTTATGG CAGCATACTC TTTTAATGAC CATCTCATCT GAGAGTAATA 
    AGCACTTG

    Gene models with high sequence identity

    1. AT3G48140.1 [+] show detail - B12D protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G48140.1

    Model type
    Protein coding
    Short Description
    B12D protein
    Computational Description
    B12D protein; CONTAINS InterPro DOMAIN/s: B12D (InterPro:IPR010530); BEST Arabidopsis thaliana protein match is: B12D protein (TAIR:AT3G29970.1); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR