F12618

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	cauline leaf (PO:0000013)	epinastic (PATO:0000945) (Cauline leaf::Shape::epinastic)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) epinastic (PATO:0000945) (Rosette leaf::Shape::epinastic) increased width (PATO:0000600) (Rosette leaf::Shape::wide) present in fewer numbers in organism (PATO:0001997) (Rosette leaf::Number::few)
	stem (PO:0009047)	increased thickness (PATO:0000591) (Stem::Shape::thick) present in fewer numbers in organism (PATO:0001997) (Stem::Number::few)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F12618

Determination of introduced cDNA(s)

RAFL06-81-C08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-81-C08 - Resource: pda03797

full reading [+] show sequence

ACAGAGTTTC GGCTCCTCCG TTGTGTTTCA GGACGACGCA AAGGGGAAAA 
AAAATTGAAT TCTTTCTCTC CAAGCGAAAC TAGGGTTTCG AAAGTCTCTG 
TCTCATCAAA GCTTCGAAAA GAAAGTGATT GCATTAAGAG AAACATTGGG 
ATAAAAGATG AGCTTTACTC AGGCTAATTG TTTTCGACCA TCCTACTATC 
CTGCAAGGAT AACACGACCA AATTGCATCT CCAGTGTACC TATTAGGTCT 
TCAGTACGCT TTGATCACTT CCCGCGTACC TCGTTTACTC TTCGAGCTAC 
TGCTGCAGTG TCTACTCAGT TTTCGCCTCT TCTTGATCAT CGCCGTCGTT 
TACCTACTGG GAAATCGAAA CAAAGTTCTG CTGTGTGCTT ATTTGGTGGG 
AAAGATAAAC CTGATGGTAG TGATGAGATA TCGCCATGGA AAGCAATAGA 
GAAAGCTATG GGGAAGAAAT CGGTTGAAGA TATGTTGCGA GAGCAGATAC 
AGAAGAAAGA CTTTTATGAT ACTGACAGTG GCGGCAACAT GCCTCCACGT 
GGAGGAGGCA GTGGTGGCGG TGGTGGAAAT GGTGAGGAGC GTCCTGAAGG 
GTCAGGAGGA GAAGATGGTG GTCTTGCTGG GATCGCAGAT GAAACTTTGC 
AAGTGGTTTT GGCGACCTTA GGCTTCATCT TTTTGTACAC ATACATTATC 
ACTGGGGAGG AATTGGTCAA GCTTGCAAGG GATTACATTA GGTTTCTTAT 
GGGAAGACCT AAGACTGTTC GATTGACCCG AGCCATGGAT AGTTGGAACG 
GATTCTTGGA GAAGATGTCG AGGCAAAGAG TGTATGATGA GTATTGGCTA 
GAAAAGGCGA TCATCAACAC ACCAACCTGG TATGATAGCC CTGAGAAGTA 
CAGACGTGTT ATCAAGGCTT ATGTTGATTC AAATTCTGAT GAAGCTTATG 
TGGAATCAAA TTCTGATGAG GTATCTTACT AGGTTAGGAA CAGGAAGAGA 
TCCATAATAA CAATTGAGTT TTTTTTCTTA GTGTTTGAAA TTTAGAATCA 
GTTTCTTTGA ATTGGATTTA TGTTCGTACA TTTGTATGGA ATTGGTTTAT 
TTATACACGA TGAACATTCT CGAGGGAAAA AAAAAAAAAA AA

Gene models with high sequence identity

AT2G43630.1 [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: ch...
E-value: 0; Score: 100.00

InterPro Scan Digest

See the detailed result >

AT2G43630.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR