F17137

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F17137

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F17137

Determination of introduced cDNA(s)

  • RAFL09-82-H05 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-82-H05 - Resource: pda08875

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-82-H05 - full reading
    AAAAAGAAAA AAATTATCAG ACTTTCAGAA GAAGAAAAAA CGAAGGAGAA 
    GAAGAACAAT TTCGCGGATT CAAGAGACAG AGAGCTTCTT CTGCGTAAAG
    TTTGATCCTT TGAAAATGAC GGAAGAACCA GAGAAGGTGT CTTCTTCAGT
    ATTACATCAA CCTTCTGGTG ATAAGAAACC TGAAGATGTT GGGATCAAAC
    CTCAGGATCC AGCGTCTTCT TCTGGGTTTC GAGCTTATCC TAATGGTGAT
    TCTCCAATGT ACCCGGTTTT TTATCCGGGT CTTGTTCCCG GATCCAATCC
    TGTACAGTAC GAGGAACAAA TGAACCGTGG AGCTGGGATC TATGCGGTTC
    CTGTTCATCA ATTTGGAGGA CATGTCGCTG GTCTTCCCTC AAATTATCTT
    ATCCCTCTCA CTTACAATGT TCCAACGACT AGACCAAATA ATGAAGCTGA
    GACTGGGGGA GAGAATCAAG CGCAAGCTGG GCAGGGTCAG CAGCAGCAGC
    TACCTGCAAA TCAAAGGCAT GTTGTGGAAA GGAGATTTCA GATCGCGTTT
    CAGCTTGATT TGTTTCTCAT ACTCAAGCTT GCTGCTGTTA TCTTTTTGTT
    CAACCAAGAT GGATCAAGAC AAAGGCTTGC TGTTCTTGTG ATTTTCGCTA
    CCATAATTTA CTTATACCAA ACTGGAGCTC TTGCACCGTT TGTGCGATGG
    CTCTCACAAG GTATGCATAG AGCAGCAGTA CCACCTGCTC GACCACATAG
    ACCTGCTGTT AGAGCTGATA ATGATCCCGC AGCTGCAGTT CCACTAAACG
    AAAATGCTGT TCTCGAGGGA GAAGAGAATG AAGCTGATAA CGGTAACCGA
    GCAAGAGCAA ATGCAAATGA AAATGAAAAC GTTGACGCAG GAAACCAAGG
    GAATCAATGG TGGGGGATAG TGAAAGAGAT TCAGATGATA GTGTTCGGCT
    TCATAACTTC ATTACTCCCT GGTTTTCACA ACATAGAGTA GAAGTAGACT
    CTTTTCTGCA TACTTTCATC TTCTGCAACT CAAAAAAAGT GTTGTGTTCT
    ACTTTTAGTC TCCTTCGATC TAATGTGTAA GTACAGAAAA TTTTACCCTT
    CAGACTCCAA AACTTAATGT ATGTGAGCCG CAATTTTTAT GC

    Gene models with high sequence identity

    1. AT4G29960.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G29960.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR