F17518

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F17518

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F17518

Determination of introduced cDNA(s)

  • RAFL06-68-A17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-68-A17 - Resource: pda03288

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-68-A17 - full reading 
    GGACAATCGT TCCGCTACTG TTCATTTTCT CTCTCTTTGA AGTTTTTTCC 
    AGTTTTTACA GATCTAGTTT TTTCTGCCTC TGTTCTTCAT CTTAGGTTAT 
    GAATTTGCAA GACAAAGCAG GAGTAAGGCA AGCTATCTTC TCCGGCATTG 
    GAGTGGTGTG GTTTTTCCGG TAAGCGTGGC AGCGGTGGCC CTTTCTCGGT 
    GGATGAGAGG CTTCTCTTCC GTTTCTTCCT GGTTATGGAC GTCGGTGGAG 
    ATCGGTGAAG TCTTTCTTGG TTCAACCACT TGGTTAGACG CTGTAGCTGT 
    GGCGGAAGAC GCTGTGGATT GGTGGGTTTT CAGTGCGTGT TTGATGGTTA 
    ACAAACTGGA TCTGAGATGG CTGTTGCGGG TTCCGGTTGC TGAAGGGTTG 
    TCTGAGCCAT CACCCTTCTT TAGCCTCCGT TTTTTGTCTC CATCAATCCG 
    GATTGAAGGT TGCTTTGCTT TTGGAAAATT TTCAGATCTA AGGTTTTGGA 
    GGTCAGAGGC TTGGAAATGC GTGGTCGTTT TGCGAGGTTG GGGACTCGAC 
    CAAATTGGGT GGCGGAGTGT CGGAAACTGG GTTTTTTCCG TTAGGTTTGT 
    TGCAGGTCCG GCCAGCTCAT TGGTAAGAGA TTTGCGGCAG GACTCGTATA 
    CTTCGGCCAA TGATCTCGTT CCGGTGGTTG TGTTGCAAAG TAGTGGGCCT 
    TGTATACGAC GGTACTAATA GATCTATTTG CTGCCTCCGT TCCACTGCCC 
    AAATCCACCT CTGGTTCTCT TTTTCCGGTG ACCGGATTTT TCCTGTTTTG 
    TAACTGTGGA CGATTGTAAT TCCGGGCCTA AGCCCAATTG GGACTGGACC 
    TTTTTTTTTA AAAAAAAAAA AAAAAGATAT CTCGTTTGTG AAGAAAAAAA 
    AAAAAAAAAA

    Gene models with high sequence identity

    1. AT1G03420.1 [+] show detail - transposable element gene
      E-value: 0; Score: 99.89

     

    InterPro Scan Digest

    See the detailed result >

    AT1G03420.1

    Model type
    Transposable element gene
    Short Description
    transposable element gene
    Curator Summary
    Member of Sadhu non-coding retrotransposon family
    Link
    InterPro Scan - TAIR