F19034

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F19034

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F19034

Determination of introduced cDNA(s)

  • RAFL06-12-D17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-12-D17 - Resource: pda03100

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-12-D17 - full reading 
    GCGTTGAGAG AAAAACGTTG AACGATGGGA GCCGGTAATG GAGAAACGCC 
    AAAACCTACA CAGATTTCAA TTTCTAAAGA TCAATTCCTC GCTTGGAAAC 
    GCCAAAAGGA TGCTGAGTTA TTAGCCAAAC AAGCTGAAGC AGCAAGGAAA 
    CGACAAGAGG ACATAGCTTC AGGTCGTGTT CCAATGAATG GTCGTGAGCT 
    TTTCTTGCAT GAGCCTTGGG TTTTCGACGA TACTCATCAT TGATTCTGGT 
    CTATTCACTA CTTCTTCATA GGTGATTTAA GACATTTCCT CGATGATTTG 
    TGATCCAACT CTGTTTCTCT TTTGTTGTTG TACTCTCATG TTCCCACTTT 
    TGTCTCAAGT GTTAAATCAG AAATTTAGTC CTCAGTAATT GTGACTTAAT 
    CGTTGGCTCT GATTATTTGG AAATTTGGTG GTTGAATGTT AC

    Gene models with high sequence identity

    1. AT1G22140.1 [+] show detail - unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazo...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G22140.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR