F19108

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F19108

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F19108

Determination of introduced cDNA(s)

  • RAFL06-16-J22 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-16-J22 - Resource: pdz87614

    3 prime EST [+] show sequence

    Nucleotide sequence: RAFL06-16-J22 - 3 prime EST 
    GAAAGAAAGA GTAATATACA TTAACAATCC TGAGTTTCAA GATTCTTGAT 
    CAAGACAAAG AGTAAAAAAC AATGATGCAA GAGAGTTGAA AGTACACTCG 
    ATATATTTTG ATCTACATTT ACTTGACGAA GTAAGGAAGG TCAAGAACGT 
    AGAGAAGGAA GTAAGCCCAA GTCACCCCCA GAGAT

    Gene models with high sequence identity

    1. AT4G12800.1 [+] show detail - photosystem I subunit l
      E-value: 2e-96; Score: 100.00

    AT4G12800.1

    Model type
    Protein coding
    Short Description
    photosystem I subunit l
    Curator Summary
    Encodes subunit L of photosystem I reaction center.
    Computational Description
    photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR