F20239

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F20239

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F20239

Determination of introduced cDNA(s)

RAFL06-87-H12 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-87-H12 - Resource: pda07754

full reading [+] show sequence

GAAGTTAAAA AAATTATTCA AGAAACACGA GAACAAAAAC AATGGCGAAA 
TTATTCATCA AGCAAGCAGA GCAATATGCA GCAGCCCGAC CCAGTTACCC 
CACCAAACTC TTCGAATATA TCGCATCGAA AACACCGTGC CACGACCTTG 
CCTGGGACGT TGGCGCCGGA AGCGGCCAAG CCTCACGATC GCTAGCCGGA 
ATCTACAAGA ACGTGATTGC TACAGACACG AGCTCAAAGC AACTTGAATT 
TGCTGCAAAG CTTCCCAACG TCCGTTACGA GATCACTCCA CCGACGATGT 
CTTCATCGGA GATCGAGAAG CTAGTAGCAC CTGAATCATC AGTTGATTTA 
GTCACCGTCG CTCAAGCCCT TCATTGGTTC GACCTCACGA ACTTTTACAG 
CAACGTGAAA CACGTGCTCA AGAAACCCAA CGGAGTAATC GCCGCCTGGT 
GCTACACCAA TCCGGAAGTT AACGACGCCG TGGACAAGGT CTTTCAACGG 
TTTTACGATG AGAAACTTGG TCCTCATTGG GATCTAGCGC GACGGCTTGT 
GGAGGATGGG TACAGAGGAA TTGAGTTTCC GTTCGAGAAA GTGGATAATG 
ATGAGTCAAC GGAAAGTCAA AGTTTTCCGG TGAGGTTTGT AACGGAGAAA 
GAAATGGTGT TTGAAGAGTA TATGACGTAT CTGAGGTCAT CTTCGGCGTA 
TCAGACGGCT AAGGAGAAAG GTTTAGAGCT TTTGACGGCT GAGATGGAAG 
GAGAGTTTGC TGGTTCGTGG AAAGAAGATG GGAAAGAGAA GAAAGTTGTT 
AGGTATCCGA TTTATCTGTT GATCGGAAGA GTTGCAGAAG AACGTGTATA 
AATTGATATC TCTCAGTTAG GCATTTCGTC GAACACCTTG TGCTTACACA 
CAAGAAGACA TTAGTTTTGA TTGGTTCAAT GTAAAAATAA AACTTTGTCG 
TTCCAGCATT CCTGGGGATC TCTAATCTTT CCTTTTTTAC CCCACGCGCG 
ACT

Gene models with high sequence identity

AT2G41380.1 [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
superfamily	S-adenosyl-L-methionine-dependent methyltrans	1.8e-20
HMMPfam	Methyltransferase type 11	0.00000000027
HMMPanther	2-HEPTAPRENYL-1,4-NAPHTHOQUINONE METHYLTRANSF	0.0000012
HMMPanther	METHYLTRANSFERASE	0.0000012
Gene3D	no description	0.000000000001

See the detailed result >

AT2G41380.1

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61210.1); Has 1429 Blast hits to 1424 proteins in 497 species: Archae - 6; Bacteria - 922; Metazoa - 80; Fungi - 179; Plants - 160; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link: InterPro Scan - TAIR