F20403

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F20403

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F20403

Determination of introduced cDNA(s)

  • RAFL09-86-H02 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-86-H02 - Resource: pda06888

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-86-H02 - full reading 
    TGAATCAAGA CAACGAAAAT TAACAATGGC GACTAGGTTT TTGGTGAAGA 
    GACTCACGGC GGTGAATGTT TCAAGAACTC CTGGGGGAGA TTTCTCCGGT 
    TATGCTCTCC GACAAGCTAC AATCGGAATC AACCACTTCT CAACCGGATT 
    TAAGCAAACG GAGGGCTCTA CTCATGACGA TAAGTCCACG ACGAGTTACG 
    TGGCAGACAA GGCAAAGGAA GGGGTGAAGA AAGCGACCGA CGCAGCCGTC 
    AGCACGGGTG ATAACATGAA GGATGCGATG GATGGTGCGT GGAAAGCGGC 
    TAAGGAAACG GGTCAAAACA TTAGCGATGC GGTTACGGGC GATGATGATG 
    ACGGCAGAAT TCAAGAGGAT AAGGTCGCAG TGGAATTGAA GGATGTGCAA 
    CAGCCTGTGG ATACGACGGA GTATAGAGGT GTGGAGGATC TACATCAGCA 
    AACCGGCGGA GAAGTTAAGT CACCCTAAGC TAATGTGTTA GGGTGTCTAT 
    CCTTTCTTTC ATTGTTGTTT CAGTGAGAGG TTGCTTGTGC CTCGTGGTTC 
    AAATTAAAGG TTTATGAATG GACCGTGGCC

    Gene models with high sequence identity

    1. AT3G15280.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED I...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G15280.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; Has 36 Blast hits to 36 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR