F21325

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21325

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F21325

Determination of introduced cDNA(s)

  • RAFL05-03-G07 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-03-G07 - Resource: pda00798

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-03-G07 - full reading 
    AAAAAACCAA CATAAAACAC AACCCAAAAA TGGAGTTACT AACGACGGTC 
    GCGAGCTTTT TCACTCCGAC GACTCTTTTC CTCCTTCTTA ATCTTATGAT 
    CGGTACAATC GTCGTAACCT CTCGACTCGG GTCAGGTTCA AGAAAACATT 
    ACCAGCATCA CGATGGATTC GGGTCAGGTC ATGCTCCGGC TCCGTTAGCT 
    AGAGCTCCAT CGATTATCGA CCGAGTCAAG TCCATCAATT TTCATCTCTA 
    CAAATTTCCT CATCCAGAAA CTGAGCTTTT CTCGATGACA GCTCACCACG 
    ACATAATCGG GTCGGATCTT CATGTTTACC CGGATCCAAA TCCGGCTCCG 
    TTACAACGTG CTCCTTCTCT TTTGGATCGG GTCAAATCTA TCAACATGTC 
    TTATTTCAAG TTCCCACACG ACGTAACCGG GTCGGATCCT CACTCCCACT 
    CCCACTCCCA CCTAGATTTA CACCCGGATC CGGCTCCGGC ACCGTTACAA 
    CGAGCTCCTT CTCTTCTGGA TCGGGTCAAA TCCATCAACA TGTCATACTT 
    CAAATTCCAG CAGTATAACC CGGAGGAGAA TGATTATGCT CATCACACAG 
    AACCGACCCG ATTCGAAAGT ATTCCGACCC GGATGGGTCG GGTTGACCCG 
    ATTGATATCT CAAAATTCAG AATCCCGGAA GAAGATCAAC CAACCGGAAC 
    CGGAGTGAAC AGTCAAATTA ACCCGCCCGG TTTAACTCGA GCTCCGTCTA 
    TCTTAGAACG GGTCAAATCC ATTAAGCTAT CCTCCTTCTA CAGATCCGAC 
    CCGGATTTGG ATCAAAAACA AAATCCGGAT CCGGTTCTTC ACGAGGAGCA 
    CAAGCATGTA CGAAGCAGAT CGGAATCGAA AAAACCGGTG AAGAAGAAGA 
    AGAAAGCTTT AACGAAGATG ACAAAATCGG CTAGCGAGAA ATCAGGTTTT 
    GGTTTCGCAG GAAGCCATGC GGAAGCGCCG GAGACGGTGG AATCCCTCGA 
    ACGGAGAAGA CCAGATACAA CGAGAGTCGA AAGATCGACG TCTTTCGGCG 
    ACGGCGAAGA TGGCGTCGAC GCGAAAGCTT CAGATTTCAT CAACAAATTC 
    AAACAGCAGC TGAAATTACA GAGACTCGAT TCGATTCTGA GGTACAAGGA 
    GATGCTTAAG GCCCATTGAA GCCGTCTCCG TCGCCGGTGA TTATTGTATT 
    CCTCGCCGAT GTCTGGCTCG CGGTTTTGTT TGCCGCCGTT TTTCACGTAG 
    GAGACAGGAG TGGACATTAT CTGAATTACC GATAATATCC CTGTATGTTT 
    GAGGATATTT AAGTAATTTA TTAATTAGTT AATGTGAATT TGTTATTGTT 
    TAGTTCATAA AGAGACAAGA AAGAAAAAAA CGTAGTTGCT TAGCGAAGTA 
    TGTGTGGCGT TAAAATTGGA TCTAGGACGT TGTTTTGCGT CTTAATTCTA 
    ATGATCATTC ATTCACTTGG CAATTTTTTC GAGATGTTTG GTACACGTTT 
    CCTATTTTCT GCCCTATTTT CAGGTTGGTT TATTCTATTT ATTTAAAATT 
    TTCTAGGCAA AATTGTTCGT GCCATGATAC AGATTATATT AAGAGTTCTA 
    TTTGAATATT TTTGTACATA TACAGATATA CTTCCTATTT TGTATCATAT 
    ATACTTTTAG ACT

    Gene models with high sequence identity

    1. AT5G56980.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 99.94

     

    InterPro Scan Digest

    See the detailed result >

    AT5G56980.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR