F21912

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21912

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F21912

Determination of introduced cDNA(s)

  • RAFL06-81-C08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-81-C08 - Resource: pda03797

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-81-C08 - full reading 
    ACAGAGTTTC GGCTCCTCCG TTGTGTTTCA GGACGACGCA AAGGGGAAAA 
    AAAATTGAAT TCTTTCTCTC CAAGCGAAAC TAGGGTTTCG AAAGTCTCTG 
    TCTCATCAAA GCTTCGAAAA GAAAGTGATT GCATTAAGAG AAACATTGGG 
    ATAAAAGATG AGCTTTACTC AGGCTAATTG TTTTCGACCA TCCTACTATC 
    CTGCAAGGAT AACACGACCA AATTGCATCT CCAGTGTACC TATTAGGTCT 
    TCAGTACGCT TTGATCACTT CCCGCGTACC TCGTTTACTC TTCGAGCTAC 
    TGCTGCAGTG TCTACTCAGT TTTCGCCTCT TCTTGATCAT CGCCGTCGTT 
    TACCTACTGG GAAATCGAAA CAAAGTTCTG CTGTGTGCTT ATTTGGTGGG 
    AAAGATAAAC CTGATGGTAG TGATGAGATA TCGCCATGGA AAGCAATAGA 
    GAAAGCTATG GGGAAGAAAT CGGTTGAAGA TATGTTGCGA GAGCAGATAC 
    AGAAGAAAGA CTTTTATGAT ACTGACAGTG GCGGCAACAT GCCTCCACGT 
    GGAGGAGGCA GTGGTGGCGG TGGTGGAAAT GGTGAGGAGC GTCCTGAAGG 
    GTCAGGAGGA GAAGATGGTG GTCTTGCTGG GATCGCAGAT GAAACTTTGC 
    AAGTGGTTTT GGCGACCTTA GGCTTCATCT TTTTGTACAC ATACATTATC 
    ACTGGGGAGG AATTGGTCAA GCTTGCAAGG GATTACATTA GGTTTCTTAT 
    GGGAAGACCT AAGACTGTTC GATTGACCCG AGCCATGGAT AGTTGGAACG 
    GATTCTTGGA GAAGATGTCG AGGCAAAGAG TGTATGATGA GTATTGGCTA 
    GAAAAGGCGA TCATCAACAC ACCAACCTGG TATGATAGCC CTGAGAAGTA 
    CAGACGTGTT ATCAAGGCTT ATGTTGATTC AAATTCTGAT GAAGCTTATG 
    TGGAATCAAA TTCTGATGAG GTATCTTACT AGGTTAGGAA CAGGAAGAGA 
    TCCATAATAA CAATTGAGTT TTTTTTCTTA GTGTTTGAAA TTTAGAATCA 
    GTTTCTTTGA ATTGGATTTA TGTTCGTACA TTTGTATGGA ATTGGTTTAT 
    TTATACACGA TGAACATTCT CGAGGGAAAA AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT2G43630.1 [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: ch...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G43630.1

    Model type
    Protein coding
    Computational Description
    FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR