F21939

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21939

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
rosette leaf (PO:0000014)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
stem (PO:0009047)
  • present in fewer numbers in organism (PATO:0001997)
    (Stem::Number::few)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F21939

Determination of introduced cDNA(s)

  • RAFL05-19-G17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-19-G17 - Resource: pda02781

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-19-G17 - full reading 
    AGTCACTTAA CCGGAGATCG GAGACTCATC GTTGCAACAA CAACAAATTT 
    CAGAAGATCC GAAGACGAAA CGATGCCTAT AAGTGCGACA ATGGTCGGAG 
    CTTTGCTGGG TCTCGGTACC CAGATGTACT CCAACGCCCT CCGCAAGCTC 
    CCTTATATGC GTCATCCGTG GGAGCATGTG GTGGGTATGG GACTTGGTGC 
    TGTGTTTGCG AACCAGCTCG TGAAATGGGA TGTGAAGCTT AAGGAAGATC 
    TTGATGTGAT GCTCGCTAAG GCTAGAGCTG CTAATGAGCG CCGTTACTTT 
    GATGAAGATC GGGATTAATT TTGCGTGATC TTTGAAGTCT TCAGAAAAGA 
    AATATCTTCC CCTGAACTCA TCTCAAGTGC TTGTTTTGTC TGATCTTTCC 
    TGTATAAGCG TTTCTTCTCC TTCTCTTTGA CTTCAGCTCT GGAGTTCTTT 
    TCATTCACTG TTTTCGAATA TGAACCTAAA GATTTGTGTT TTCACAATCT 
    GAATCTGTTT GTATCTGGTT AATAATGGCG AAATGATAAA CCTTGCAATC 
    AAAAAAAAAA AAAAAAA

    Gene models with high sequence identity

    1. AT4G20150.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G20150.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR