F24811

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F24811

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F24811

Determination of introduced cDNA(s)

RAFL06-83-H22 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-83-H22 - Resource: pda03853

full reading [+] show sequence

AAAAAAGGAA ACACACAAAA GCCCTAAATC TCTTTTTAAC CTCTGAAGCA 
AAAACCACCA CATCGGAGAT TTCTAATCCA ACGAAAACGC TTCAATTTTC 
TTGCGATTTC TCTTCCTCTG CGAAAAACCC TTTTGGATTC AGACTTTCCT 
CGGTTTACCA GTTGGACTCA GATAGAAGCT TATATCTGTA CCTGATAATT 
TGCAGCAAAT ATGGATGACT GGGAGGACGA GAAAATTGCA CCACTTCCAG 
CAAAAGTTGA GCTTAAAAGT AACTGGGATG ATGAAGATGT GGATGAGAAT 
GAAATTAAGG ATTCATGGGA GGATGATGAT GATGAACCTG CTCAGCCGCC 
TGTTATAAAT CCTGCTCCGG AGAAGGCTCC TAAGAAAGCA GCCCCCAAAA 
CTGTTGAAAA GAAGGGTAAA GCAGTCGAAG TTCCAAAGGA AGCACCAAAA 
GAAAAACCTC TAGATCCTAT AGCGGAGAAA CTTCGCCAGC AGAGGCTTGT 
TGAGGAAGCC GACTACCGGG CAACTGCTGA GCTCTTTGGA GTGAAGGATG 
ATGACAAAAA CCTTGATATG TTTATCCCCA AGTCTGAAAG CGATTTTTTG 
GAATATGCTG AAATGATTTC TCATAGGATT AAACCATATG AGAAAAGTTA 
TCACTATATA GCGCTGCTCA AAACAATCAT GAGACTTTCA TTGACCAACA 
TGAAAGCAGC TGATGTTAAA GATGTTGCTT CGTCCATTAC AACGATAGCA 
AATGAAAAAC TAAAGGCAGA GAAAGAAGCT GCTGCGGGAA AAAAGAAAGG 
TGGAAAGAAG AAACAACTTA TTGTAGATAA GGCCAATGAC GATCTAGTGG 
CTGGTCCTTA TGATGCCATG GATGACTTCG ACTTCATGTA GATTAAAAGA 
GCTTTTTGAG CAAATGCAAA TTGGATTTGT CCAGCGTCTA TTTTATCATT 
TATCTATCAC TCAAAAGAAA CACATTTTTC TTAATTTTGG TTTGAATAGA 
GCAAGAAGAG CCAAATTTCT GGTTGCGGAA ATATATAGTT GGAACATGGG 
AAGCTTTTGT TTTGGTTTGG TCTGGGAATT CTCTAGAGTC ATGTTTTTGG 
TTCTATTTGT TGGTTGAAAA AGCTATACTT AAAGTGTCCG TATAAATTTA 
TTATTGACTA AAAAAAAAAA AAAAA

Gene models with high sequence identity

AT1G66070.1 [+] show detail - Translation initiation factor eIF3 subunit
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Translation initiation factor eIF3 subunit	8e-59
HMMPanther	Translation initiation factor eIF3 subunit	3.7e-65

See the detailed result >

AT1G66070.1

Model type: Protein coding
Short Description: Translation initiation factor eIF3 subunit
Computational Description: Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1); Has 512 Blast hits to 510 proteins in 194 species: Archae - 2; Bacteria - 36; Metazoa - 190; Fungi - 147; Plants - 83; Viruses - 1; Other Eukaryotes - 53 (source: NCBI BLink).
Link: InterPro Scan - TAIR