F25121

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F25121

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F25121

Determination of introduced cDNA(s)

  • RAFL09-69-O13 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-69-O13 - Resource: pdz88292

    3 prime EST [+] show sequence

    Nucleotide sequence: RAFL09-69-O13 - 3 prime EST 
    AGAAATAACA TGTTATTACT TGGATAATCA TCAAATAGCA GATAAATAAT 
    AATAAAAATG GGATAATTAA TTACATTTTC TCAAAGTAGA GTTTCACTCA 
    GCCTTCTCTG CTTTGGTCTC CTTCTTCTCT TCTTTCTTCT CTTCTTTCTT 
    CTCCTCTTTC TTGATCTCTT CTTTCTTCAC CTCTTTCTTC TTCTCCTCCT 
    TTGGTTTGGT ATCTCCAACA GCTTTTGGTT TGCCCGGCCT TGGTTCATGA 
    AGCAGAAGCA AGAGCAAAAT GGACACTGGA AAAAGAACTT ATTTTTTCTC 
    TTTCTCTCTT TCTCTCTCAC TTATCTTCTT CTTTTCTCTC ACACAATCTC 
    ACTCACACAT AACACATTTG CTTAGTAAGC CTTTAATGAA AGTAGAGAAT 
    T

    Gene models with high sequence identity

    1. AT5G53880.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 97.01

    AT5G53880.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR