F25244

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F25244

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F25244

Determination of introduced cDNA(s)

  • RAFL09-64-A13 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-64-A13 - Resource: pda08578

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-64-A13 - full reading 
    ACAACGTAGA GCAAGATATC TGGATACGCG GAAAATAGAG AGAAGAAATC 
    AAAAAGCATA TTTTTATTTT ATCTTTGAAA AGAAGATTAT TGTTTTTAGT 
    CTACAATGGT GACTCTAAAA ATGGAGATTT GCATCGAGTT GTTGAAATTG 
    ACCGTAGATT TCGTCGCCGC CGTTGCAGAA TCAATCGAAG TAGCTTTCCG 
    CCATCGTCCT CCACCGGTGA TTCAATATTC TTCAGTGATG TATGGTCGCC 
    GGAGTAATTA CACCGCCGTT CCCATTCCTC TCGTGGGGTT TCTGTAGTTA 
    ATATATTCTT CTTTTGTGGT TCTTTTGTTT TTTGTTCATT CTTGTTCTAT 
    TATAATTACC TTCTTGCCTC GGACAAAAAG GTATATTTCT TATGAAAGAA 
    CAAGATGTGT TTTGTGTATA AACCAAAAAA ATCACGAAAA GTTTACGTAA 
    CCCGTGAATA TATAAAAGTT TAGACGTTCC CGATTGTATA TATTTTTTTC 
    GATATATATA TTTTGTTTAT TCATAAGACC CTTAAATTAT ATGTTTCTAT 
    TATATCAATG TGTTCACACT TTCATGGTAG ATCTGATCTT GAAGAGGGCA 
    GAGGTTGATA TATTTGGGTC ATAGTCGAAT AATGATCGTG GCGATATTTT 
    TTTAATTCCA CTAGACAAAT ACAAAACCTA TTATCTTATC CATGTTTGAG 
    ATTTAAGATT AGAATTGTTT TTTGGGTGGT GTCCACACCA AGTAACGTGT 
    CGGATACTAT TTTTGGAAAA TTTGTTTTGT TCTTGACGAA TCGTGGCCCA 
    TCTTTGATCC ATCTTCGATG CAACACCGAA ACAGCAACTG ATATGTAGCT 
    ATGAGGAACA CAGATTTGTG GTACTTTTGT ATATACTAGA TGAGTACTCG 
    CACTACGTGC GGGTTTACAT ATTACTATTT ACAAATTATT TTATATAATA 
    TTTGTTCATA TAAAATAAAG TTGAATGCAT CGGTATTGAA G

    Gene models with high sequence identity

    1. AT1G49500.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G49500.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR