F26545

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F26545

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F26545

Determination of introduced cDNA(s)

  • RAFL09-26-H23 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-26-H23 - Resource: pda05815

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-26-H23 - full reading 
    GCTTTTATAG AAGAAGTAAT CTCTCTTTTT CTCTATTTCT CTGTATTACT 
    TTCTCTTTTT TTTTTCGTGA TGGAGAAAAA CACACCGGTG AGGAAACCAC 
    ACATGTCGAC GGCGGATCTA CTCACTTGGC CGGAGAATCA ACCGTTTGAG 
    TCTCCCGCCG CCGTATCTTC TCGCTCCGCC GCCAGATCGC ACCAGCCGTC 
    GGATGGAATA AGCAAAGTCG TATTTGGAGG ACAAGTTACA GATGAAGAAG 
    TTGAGAGCTT GAACAAGAGG AAGCCTTGTT CAAATTACAA GATGAAAGAG 
    ATCACAGGGA GTGGAATATT CTCTGTGTAT GAAGAAAATG ATGATTCTGA 
    GTTAGCAAGT GCTAATTCCG CCACAAACGG CAAATCAAGA ACTTTCCAGC 
    AACCACCAGC AGCAATTATG AGTCACATTT CATTTGGAGA AGAAGAGATT 
    GTTACACCGA AAAAGCCAGC GACGGTGCCA GAAGTTGCAA AGCAACGTGA 
    GCTTAGTGGT ACATTGGAGT ATCAATCTGA TGCTAAGCTT AACAAGCAAT 
    TCTCAGATGC GAAGTGTAAG GAACTAAGTG GTCATAACAT CTTTGCTCCA 
    CCACCTGAGA TCAAACTTCG TCCTACTGTT CGTGCTTTGG CTTATAAAGA 
    CAACTTCGAC TTGGGAGAAT CCGATACCAA ACCCGATGGG GAACTAAAGA 
    CGGCCAAGAA GATTGCGGAT AGGAAGTTTA CAGATTTGTC GGGTAACAAC 
    GTGTTCAAAA GCGATGTTTC GTCTCCCTCT TCCGCCACGG CTGAGAGGCT 
    TCTAAGCACG GCGAAGTTGA AGGAGATAAG TGGCAATGAC ATATTTGCTG 
    ATGCGAAGGC TCAGTCTCGT GACTACTTTG GCGGTGTTCG TAAACCACCA 
    GGCGGAGAAA GCAGCATTGC ATTGGTCTAA ACCCCAATAA TAATTATATA 
    GCTCAAGATT AAAATTCTCT ACAAAACTTA GAAGGTTCTA ACTATTTATC 
    TTCATTAATA GATTATGTAC TTTTGGATGT TTTTATTTCT ATATTTTCCG 
    GTTTTGTGTG ATTGAATGGT TATGAATTGA TCTGAGTTTG TTAACCGGAA 
    AGCTAATCTG GTCTCTTAGG AATTTGTGGA GTTTGTTTGT TTTTTGTGAG 
    TTCAGACTTT AACTATGAGT CCATTGTTTG GGTCTGTCTC TGTATTTGTT 
    GGGTACTTGA TTGATTTTGT TGATTAAAAA AAAAAAAAAA A

    Gene models with high sequence identity

    1. AT1G35780.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78150.2); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G35780.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78150.2); Has 145 Blast hits to 144 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR