F27201

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F27201

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F27201

Determination of introduced cDNA(s)

  • RAFL06-70-E09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-70-E09 - Resource: pda07647

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-70-E09 - full reading 
    AATTCATTTC ATAATCATAC ACCTCTCTAC ATTTGTTACT ACTTTCTTCT 
    AACTTGTTTT CAAAGAGAAA TCACAATCTA TCTGTTCCAA GATGAGTCAA 
    TACAGCCAAA ACCAATCTTC AGGAGCTTAT CCTACGCCGC CAGTGTCTAC 
    CGGCCCTTAC GTGGCACCGC CACCGCTAGG TTACCCAACG AACGACACAA 
    GTCATGCCAC GGTGGCAACG GTGGAGACAA AGTCCAAGGG TGATGGATTC 
    TTAAAAGGCT GTCTTGCGGC CATGTGTTGT TGTTGTGTCC TCGACGCATG 
    CTTCTGAAGA CTTAGATGGT TTATTTTGAT TATCTTTGTA TTTTGCTTTA 
    CCAAAATGAT TCGACTAGGT TTATGACATT TGGTACTTCT ATTTGTTAAT 
    TCATTTCTAT ATCACTCTTT CTTTTGCATT GTGTAATTTT ATAAATTCTT 
    AATATATCGT TTGTTTTCTC TTAGACATCT TCTAAACCAC GCTAGATTCA 
    CATTTTTGAC TTTATTACCG GTTAGTCAAC GTGGACTTAA AATCAATTTA 
    ATAACACTAT ATAAGCCAAA GTTATAAACA ATTAAAAAAA AAAAAAAAA

    Gene models with high sequence identity

    1. AT2G32210.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32190.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G32210.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32190.1); Has 214 Blast hits to 214 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR