F27801

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F27801

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • present in fewer numbers in organism (PATO:0001997)
    (Stem::Number::few)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F27801

Determination of introduced cDNA(s)

  • RAFL06-86-L16 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-86-L16 - Resource: pda07743

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-86-L16 - full reading 
    AAGACATTTA TCAAAAACAA AAAGAGTTGA TAAACTACAG TAATGGAAAA 
    TGAGGGTTCA TGATCAACGG CTGAGATTTG ATGTCACACC CAAGCCGATG 
    GGTTTGAACG GAAGTTCTTT GATCACGGCA AGATCCGTCG CACTTCTTCT 
    CTTTCTCTCT CTGCTTCTTC TGATTCTGCC ACCGTTCCTG CCGCCGCTTC 
    CACCGCCTCC GGCGACACTC CTCCTCCTTC CTCTACTCCT CATGATTCTC 
    CTCATTTTCT TGGCTTTTTC TCCTTCTAAT GAGCCCAGCC TCGCCGTTGA 
    ACCTCTCGAC CCCTGATGTC GGCGACTTGC GTTGCGAACC GTCCGTACAT 
    ACATAATATG CATTACACAA ATATGTCTAA TTGTGTCTCT ATGTGTATGT 
    TATTCAGGAG CAGATTAAGG GCTTTTAGTT TTAGTTTCGT GCAAGTAAGA 
    TCATGTCATG TGATAGATCT CCGAGTTTTT CTTTTCAAGG ATTTCGTGTA 
    AATTTAGTTT TTAATTACTT TCTATGAGCA ATTTTATTTT TCAAAAAAAA 
    AAAGCAAAAA AAAAAAAAAA A

    Gene models with high sequence identity

    1. AT2G41230.1 [+] show detail - unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G41230.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR