F27829

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F27829

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F27829

Determination of introduced cDNA(s)

RAFL09-38-F01 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-38-F01 - Resource: pda06179

full reading [+] show sequence

AACTCACACA AGAACCAACA CAAAACAAAA AATATTAAGA AAGTGATATT 
ATGACTTGCA GCCAAACACT CGGAAACAAC AACACCAACA AATACCAGAT 
CTGCGAGGAG ATCGGCCGTG GCCGTTTCGG CACCGTCTCT CGCGTCTACG 
CTCCGGCTAC CGGTGATTTC TTCGCTTGCA AAACCATCGA CAAAGCCTCT 
CTCTCCGACG ACCTTGACCG TGCCTGTCTC GACAACGAGC CTAAGCTCAT 
GGCTCTCTTG TCCTATCACC CTAACATCGT TCAAATCCAT GATCTCATCG 
ACACTGATTC GACTCTCTCC ATCTTCATGG AGCTCGTCCA TCCCTCTGTT 
TCGATCTACG ACCGTCTCGT CTCTTCTGGA ACCTTCTTTG AGCCTCAGAC 
GGCGTCGTTC GCTAAACAGA TTCTCCAGGC GCTTTCGCAT TGTCACCGAT 
ACGGCGTCGT TCACAGGGAT ATTAAACCGG AGAACATTCT GGTAGATCTA 
CGAAACGATA CGGTTAAGAT CTGCGATTTC GGTTCAGGGA TTTGGTTAGG 
TGAGGGAGAG ACCACCGAAG GAGTCGTCGG AACGCCGTAT TACGTGGCGC 
CGGAGGTTTT AATGGGATAT TCTTACGGAG AGAAGGTCGA TCTATGGAGC 
GCCGGCGTCG TTTTGTACAC GATGCTCGCT GGAACTCCAC CGTTTTACGG 
CGAGACAGCT GAAGAGATAT TCGAAGCGGT ACTCAGAGGA AATCTCCGTT 
TTCCGACGAA GATATTCCGG GGGGTTTCAT CTATGGCTAA AGATTTCCTA 
AGGAAATTGA TATGCAAAGA TGCTTCTAGA AGATTCTCAG CCGAACAAGC 
ATTAAGGCAC CCATGGATCC AAAGAGCAGG AGAAACAGAG GAGAGATTCA 
TCTAGAAGAT TCTCTCGGAG AAATAAATAA GTGTCAAGTG ATAGCTTATC 
ATCTCTCTCG GTGGTTTTTT ATCTAACAAG TATGGAGGAG TGTCGGGCAT 
GTAAATTTGG GTTATGGGCA TTTTAGATTC CGCCAGCCTA CCAACCTAGT 
AGAAGAGAAG ACTCTGGAAA AGACTTTTAA CCAAAAAAAA AGGAGCTGAA 
TAATAAAAGA AGCTTGTTTG TTGTGGCTGC TTCTGAGTTT GGCGATGAGT 
TTTTTTTTTT TTTTCTGCAT TTGTTGCTTA TGTGAATTTT GTTTGGCTTT 
TGAAAAGTCT TTTTAGGGGT AGAGACGGTA ATGTAGAGAG GATAACAAAT 
CTTTTTCCGC CTTTTACGGG TTTTTTTTTC CATGTGGGGT GAGTAAAAGG 
ATGTGAGAAA GCAGAGTTGT ACTCCTTTTT CTGCTTTTTT TTTTTTTTTT 
AATCAATAAA AATAGTTTAT GTTATCCCTA AAGAAAAAAA AAAAAAAAA

Gene models with high sequence identity

AT1G08650.1 [+] show detail - phosphoenolpyruvate carboxylase kinase 1
E-value: 0; Score: 99.71

InterPro Scan Digest

Program	Description	E-value
HMMSmart	Serine/threonine-protein kinase domain	8.5e-84
HMMSmart	Tyrosine-protein kinase, catalytic domain	1.6e-10
Coil	coiled-coil	0
superfamily	Protein kinase-like domain	1.7e-84
HMMPanther	Calcium-dependent protein kinase	9.4e-95
HMMPanther	Calcium/calmodulin-dependent protein kinase-like	9.4e-95
ProfileScan	Protein kinase, catalytic domain	47.41
HMMPfam	Serine/threonine-protein kinase-like domain	1.4e-67
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
Gene3D	no description	4.1e-19
Gene3D	no description	5.2e-61

See the detailed result >

AT1G08650.1

Model type: Protein coding
Short Description: phosphoenolpyruvate carboxylase kinase 1
Curator Summary: Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.
Computational Description: phosphoenolpyruvate carboxylase kinase 1 (PPCK1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 2 (TAIR:AT3G04530.1); Has 121330 Blast hits to 119354 proteins in 3292 species: Archae - 175; Bacteria - 14755; Metazoa - 43495; Fungi - 13131; Plants - 28233; Viruses - 522; Other Eukaryotes - 21019 (source: NCBI BLink).
Link: InterPro Scan - TAIR