F30149

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F30149

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F30149

Determination of introduced cDNA(s)

RAFL04-16-A16 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-16-A16 - Resource: pda00563

full reading [+] show sequence

AAAACCAGGC AGCCACTAGA AGAAGGAGAG ATATTGAGGG AGAAGAGTCA 
CATTGATAGA TTCGCCGCCG ATCTAGAGCC GTTGATTTTC TTAATCGGAA 
AAAGAAAATG AGTGGAAGCA GAAGGAAGGC GACGCCGGCG AGTAGGACGC 
GAGTAGGGAA TTACGAGATG GGACGAACTC TCGGAGAAGG AAGCTTCGCT 
AAGGCGAAAT ACGCCAAGAA CACCGTCACC GGAGATCAAG CCGCTATCAA 
AATCCTCGAC CGAGAAAAGG TCTTCCGTCA CAAAATGGTC GAACAGCTTA 
AAAGAGAAAT ATCTACAATG AAACTGATTA AACATCCAAA TGTGGTTGAA 
ATCATTGAGG TTATGGCGAG CAAAACGAAG ATCTATATCG TTCTTGAGCT 
TGTCAATGGA GGTGAACTCT TTGATAAAAT CGCGCAACAA GGGAGGCTTA 
AGGAGGATGA AGCTCGGAGA TATTTTCAGC AGCTCATCAA TGCTGTGGAT 
TACTGCCACA GTCGAGGTGT CTACCACAGA GATCTCAAGC CTGAAAATCT 
GATCCTTGAC GCAAATGGGG TTTTGAAAGT CTCTGATTTT GGGTTAAGCG 
CCTTCTCACG ACAAGTTCGG GAAGATGGTT TGCTTCATAC AGCTTGTGGA 
ACGCCAAACT ACGTTGCCCC TGAGGTTTTG TCGGACAAAG GCTATGACGG 
TGCAGCAGCA GATGTCTGGT CTTGTGGTGT CATTCTCTTT GTGCTTATGG 
CTGGTTACTT GCCTTTTGAT GAGCCGAATC TCATGACATT ATACAAACGT 
ATATGCAAGG CTGAGTTTAG CTGCCCACCA TGGTTCTCGC AAGGTGCCAA 
GAGAGTCATC AAGCGTATTC TCGAACCCAA CCCTATTACC AGAATAAGTA 
TTGCAGAGTT GCTCGAAGAT GAATGGTTCA AGAAAGGGTA CAAGCCGCCA 
TCATTTGACC AAGATGACGA GGACATAACC ATAGATGATG TTGATGCTGC 
TTTTAGTAAC TCCAAGGAAT GTCTTGTAAC TGAGAAGAAG GAGAAACCTG 
TATCCATGAA CGCTTTCGAA CTTATCTCTA GCTCAAGCGA GTTCAGTCTT 
GAAAACTTGT TCGAGAAGCA AGCGCAACTT GTGAAGAAAG AAACGCGGTT 
TACTTCTCAA CGATCTGCGA GTGAAATAAT GTCGAAAATG GAAGAAACCG 
CAAAGCCATT AGGCTTTAAT GTCCGTAAAG ACAACTACAA GATAAAAATG 
AAAGGAGACA AAAGTGGTCG TAAAGGTCAG CTCTCCGTAG CTACAGAGGT 
GTTTGAAGTG GCGCCATCAT TGCATGTGGT AGAGCTTAGG AAAACCGGTG 
GTGATACCCT CGAGTTTCAC AAGTTCTACA AAAACTTCTC ATCTGGATTA 
AAGGATGTAG TCTGGAATAC TGATGCAGCC GCTGAAGAAC AAAAGCAATA 
AGAAATAACA AGTTGTTTCA ATTCAAAGTT TTTAATCAAT GTTGAACATG 
TATAATGAAT AGTAAACATT CTGGAGTTGG CAATATACAA GTATTGCTGA 
CAAAAGAGCC AAACTAGAAC TAGAAGTGGT CTATAGAGGT AGATCACCAT 
AGGTTAGTCA ATAGCCACAT ATGTGATCAT CCTCAAACTC GGTTTGAAAC 
CTATAAATCA AAGTTCAAG

Gene models with high sequence identity

AT1G01140.1 [+] show detail - CBL-interacting protein kinase 9
E-value: 0; Score: 99.82

InterPro Scan Digest

Program	Description	E-value
superfamily	Protein kinase-like domain	1e-87
Gene3D	no description	1.9e-66
HMMPanther	CBL-interacting protein kinase	4e-234
HMMPanther	Calcium/calmodulin-dependent protein kinase-like	4e-234
ProfileScan	Protein kinase, catalytic domain	50.52
ProfileScan	NAF/FISL domain	11.786
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
HMMSmart	Serine/threonine-protein kinase domain	1.8e-102
HMMSmart	Tyrosine-protein kinase, catalytic domain	2.1e-12
HMMPfam	Serine/threonine-protein kinase-like domain	1.4e-70
HMMPfam	NAF domain	2.6e-23

See the detailed result >

AT1G01140.1

Model type: Protein coding
Short Description: CBL-interacting protein kinase 9
Curator Summary: Encodes a CBL-interacting protein kinase with similarity to SOS2
Computational Description: CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), CBL-interacting protein kinase (InterPro:IPR020660), NAF domain (InterPro:IPR004041), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130203 Blast hits to 128118 proteins in 4349 species: Archae - 165; Bacteria - 15262; Metazoa - 47961; Fungi - 13206; Plants - 31482; Viruses - 522; Other Eukaryotes - 21605 (source: NCBI BLink).
Link: InterPro Scan - TAIR