GT109

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

small spindly plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT109

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 648382 [Map]; Strand: w
- AT2G02450.1 - [+] show detail - NAC domain containing protein 35
  Distance: 0; Region: intron1 (CDS)
- AT2G02450.2 - [+] show detail - NAC domain containing protein 35
  Distance: 0; Region: intron1 (CDS)

CTTAATATAT GAATAGAAAT TAAGCTTTCC TAATAGTTTG AGATGATTTA 
TGTGTGTATT AGTATATATA TATGTGTGTT TATGTGAATG TATATTTACC 
AGGAAGTTCC CAAGGATCAT AGCGATAAAG ATCGAGGAAA GTGATGAGTT 
CTACATTAAA GCGTTTGCCT TCGACTTTTC GGCGAAGGTA AAACTCTATG 
AGTTCTTCTT CGGTAAGATG GAATCTAAAT CCGGGCATGA CCATGTCATG 
ATCATGATCA TCAGCTTCAT CTTCATCTCT

5 prime edge [+] show sequence

Chromosome: 2; Position: 648562 [Map]; Strand: w
- AT2G02450.1 - [+] show detail - NAC domain containing protein 35
  Distance: 0; Region: intron1 (CDS)
- AT2G02450.2 - [+] show detail - NAC domain containing protein 35
  Distance: 0; Region: intron1 (CDS)

CTATGTCGAT CGATCGTTAA CAATTCTCAA TATCTTTAAA CGCTTCTCCC 
TCTTTAGTTT CTTTCTTAAA TTAACCTAAT TAAACAACCT ACATATATAT 
CATAAGATAT ACAAATATGT GTATGTTTTT CATAATTAGC TTATGTTTGT 
TTAATTATAG ATATATGTAT ATGCAGCTAT GGCGGCGATA GGAGAGAAAG 
AGTGGTACTT CTATGTGCCA AGAGATCGGA AATATAGAAA TGGAGATAGA 
CCGAACCGAG TAACGACTTC AGGATATTGG AAAGCCACCG GAGCTGATAG 
GATGATCAGA TCGGAGACTT CTCGGCCTAT CGGATTAAAG AAAACCCTAG 
TTTTCTACTC TGGTAAAGCC CCTAAAGGCA CTCGTACTAG TTGGATCATG 
AACGAGTATC GTCTTCCTCA CCATGAAACC GAGAAGTACC AAAAGGTATT 
AATTCTACTA ACTCTATATA TATCCTATTC ATACGTACAT AGATATAACC 
CTAGCTA

AT2G02450.1

Model type: Protein coding
Short Description: NAC domain containing protein 35
Computational Description: LONG VEGETATIVE PHASE 1 (LOV1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 4817 Blast hits to 4369 proteins in 130 species: Archae - 0; Bacteria - 5; Metazoa - 115; Fungi - 57; Plants - 2924; Viruses - 0; Other Eukaryotes - 1716 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02450.2

Model type: Protein coding
Short Description: NAC domain containing protein 35
Computational Description: NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink).
Link: InterPro Scan - TAIR