1. Home
  2. Mutant Lines
  3. GT11144

GT11144

CSHL Arabidopsis genetrap mutant lines

Original: GT11144

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT11144

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5996628 [Map]; Strand: w
      • AT3G17510.2 - [+] show detail - CBL-interacting protein kinase 1
        Distance: -5347; Region: intergenic
      • AT3G17520.1 - [+] show detail - Late embryogenesis abundant protein (LEA) family protein
        Distance: 2661; Region: intergenic
    Flanking Genome Sequence: GT11144 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCTC 
    GCTAACACAT CCTTTATGCG GCCAAAATCC AAATGGTTTC TTAGGCGACA 
    AGAAGTCGCA CTCCAATGGC GACCCCATTA ACGGTGGTAA GACTAAGTGG 
    TAACCCATTG GTTGATGATA AAACGATGAA ACTTTGCTAA TAGCATGATA 
    GTATTTATTA CGTTAATTAT GGTGAAAAGA TAGGTGATGT AAGACAGATG 
    AACTCCTCTG TTTTGCAAAG AATGTCATTC TAGAGTTTTA TCTTTTTATT 
    TCACAAATAT TGTCATTTTA CATTTTCAAT GTGATATTTA CATTGATTTA 
    CCCCTAAACC CAAATCATTA GTACCTTATT AAATATTGCG ATACATGTAT 
    AATAGTCTTA TTAATTTATG TGAAAGGTAT CAAAATGACA CTCTTTAATA 
    AAGGGAGTGA GTATATTTTT ATTTGTTTTG TCACAACTAA TCTAATTAAT 
    CAGTCAAAAA TTCCGTAGCA AAATGAAAGT TTAAATATTC ATATATCTTA 
    ATAAATCTTC CTAAATATTT GTTATAGCTA TTATTATGGT TTCATTGATA 
    AATGTGAATT TTAGAAAGAA AAAAATTGAG AAGCATTGGA AATATTTAAT 
    ACATTGTAAC CATAAGTGAT ATGTATATAT AACTAATTAA CCAT

AT3G17510.2

Model type
Protein coding
Short Description
CBL-interacting protein kinase 1
Curator Summary
Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.
Computational Description
CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G17520.1

Model type
Protein coding
Short Description
Late embryogenesis abundant protein (LEA) family protein
Computational Description
Late embryogenesis abundant protein (LEA) family protein; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell, seed, leaf; EXPRESSED DURING: dry seed stage, LP.04 four leaves visible, seed development stages; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT2G18340.1); Has 42102 Blast hits to 23885 proteins in 2451 species: Archae - 240; Bacteria - 12810; Metazoa - 10748; Fungi - 3745; Plants - 3219; Viruses - 271; Other Eukaryotes - 11069 (source: NCBI BLink).
Link
InterPro Scan - TAIR