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GT11334

CSHL Arabidopsis genetrap mutant lines

Original: GT11334

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT11334

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2923879 [Map]; Strand: c
      • AT3G09520.1 - [+] show detail - exocyst subunit exo70 family protein H4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT11334 - 5-prime edge 
    TCTCGTAGAA CATACAAGTT ACTTTAGCGA AAGTGTTGGT CTCAGAGTTC 
    CATCTCTCGA TTATATCCGC CGCGGATTCA ATGACTCCAT AGATAGCCGC 
    CGATTCCAAA CTCTGGCGAG GGGTTAACGT AAGAGGAGGA GGAGGTGGAT 
    ACTTGGACGG CGTTGTGGCC ACGCAACAAA TGTTTATCAT TGCTTTTCTC 
    GTCATCATCA AGTCGTCGCG GAAATTTCTA GAGGACTCAG TTTTTCCTCG 
    TTGAGAGAAA TTTTTGAAAC GATAATGCAA GTTGTGAGAG AGTTATGAGG 
    GGAGAAGATT TAGTCGTTGA AGGGGTATTT ATAAGACTAC ACAGCGTTAG 
    AGCGACGTCG TTAACTTATA TTTTGTGGTG AGGAAGCGAG GAGGAAAGTT 
    GGTGTTGACC TTTGAATATT GCCAATATGT TTTACTCTGG GCCCACACGT 
    GTTGTGGGCT TTGCATGATT TTTTGAAATG ACGTAACCTT TGTTTACCTT 
    TT

AT3G09520.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein H4
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR