GT114

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

1 shootless plant
rootless

Anatomical entity /structure development stage	Phenotypes
seedling (PO:0008037)	lethal (sensu genetics) (PATO:0000718)
root (PO:0009005)	present in fewer numbers in organism (PATO:0001997)

Original: GT114

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 15477015 [Map]; Strand: w
- AT2G36870.2 - [+] show detail - xyloglucan endotransglucosylase/hydrolase 32
  Distance: -2356; Region: intergenic
- AT2G36880.1 - [+] show detail - methionine adenosyltransferase 3
  Distance: 2351; Region: intergenic

TAGTTTTATA AACAAAATTA AATTGAGAAA ATGTCCCCGG AAGGACGATG 
CTGAAATTGA ATAATATTGG AAATTAAAGT AGCAAATAGT ATAATAAATG 
AAATTGTATA AGCTTTCACT ATTTGTGTCG GTAACGGTGT GTTACGGTGA 
TCGAGTCTTG ATTATCGACG GTTGCGGGAC CCATCTGACC GACAAAAATA 
ATTCATTAAT CCATTAGCCA AAACCAACTT CATTATTTAT TTTTTGCTTC 
TTTAGTTTAT AATAGTTTCC AATATATATG AAGATTAGAT TATAAATAAT 
TATATTGTTT CCGTGCATTT ATCTCATTGC TTTTTGTTTT TTGTGTGGCG 
AAAAATAGTT TGTTTTGATG CATTTTCGTG ATTACAAAAA AAACGAATAA 
ATAGTGATTT GGTGAAAGCT TTTGTCTACC TATTGCGGAC TGAGTTGTTG 
GGTATATTAA TTTTTCAATT ACTTGTAGTA TAAGGATACA CATCGTGAAA 
TTTCACCGAC ATAAAAAAAA GAAAAATATT TCACTCAACC CTTTTCTCTT 
TTGACAAAAC TGATGGGAAC TGATTGATCT AACTGCTTTT AATGTTCTTG 
TTTAGTGATT ATGAATTCTC ATTGTATGAA AATGTGATCA TCCGACTAAA 
ACAATTAATA TAGTGGTTTG TGTAAGTAAT GCAATTGTA

AT2G36870.2

Model type: Protein coding
Short Description: xyloglucan endotransglucosylase/hydrolase 32
Computational Description: xyloglucan endotransglucosylase/hydrolase 32 (XTH32); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endo-transglycosylase-related 8 (TAIR:AT3G44990.1).
Link: InterPro Scan - TAIR

AT2G36880.1

Model type: Protein coding
Short Description: methionine adenosyltransferase 3
Computational Description: methionine adenosyltransferase 3 (MAT3); FUNCTIONS IN: copper ion binding, methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase family protein (TAIR:AT3G17390.1); Has 10904 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5503; Metazoa - 373; Fungi - 167; Plants - 705; Viruses - 1; Other Eukaryotes - 4143 (source: NCBI BLink).
Link: InterPro Scan - TAIR