GT115

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

rootless

Anatomical entity /structure development stage	Phenotypes
root (PO:0009005)	present in fewer numbers in organism (PATO:0001997)

Original: GT115

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 278465 [Map]; Strand: c
- AT2G01620.1 - [+] show detail - RNI-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

AGATNGAAGN CGACGTGTTC ATCCCTACGC CGGAAAGCTG AAAACTCTGA 
TTCTCCGGCA ATGTCTTATG GTCACCGACA AGGGACTCCG TCGTGTTGTG 
GATGCTAATC CTCTCATCAC TAAGGTATAT TAATGGATTT AACTCTTGAT 
GAAACCCTAG ATCTATCTGA AACGTTTTTT CTCTTAGATA ATTGTGCCTG 
GATGCTCTGG ATTGACTCCT GAAGGAATCA TGGAATGTGT TGAAAGCTTG 
TCTAAGAACA ATCATAAACT AGAGACACTT CACATCAATG GCGTCAATGG 
CTTTACCAAA CAACATCTCT CAGCACTGTA TACTTACCTT TCTTCCGAGG 
GAACGATTGA CCTCGAGGTC TGTCCCAAAT GCGATGAAGT AAGGATGATT 
CCGTCTTGCT CAAGAGAATC ATGTGTAAGT ATAACTCTGT AGATNAAGAT 
CATTGAGAGT GTTTTGTGAT TCTTAGTACT AATATCATGT TTTTCTTGGT 
TGAAGAACCA GAAGCAACGC AAGTGCCGTG GATGCTGGCT TTGTATCCCT 
AGATGTGCAG AGTGCGCAGT GTGCCTTGTT GGTTCAGATA CTGAGAGTCA 
AGAACAGCGT GTGGGTAATG ATGATGTTCT GTGTCTTGAA TGTTGGCTTG 
TGCTTCCCAA NTTCANATTC TGCAATAAAA CCATATTGCA CTAATCCCAG 
TTNTCGTCGA CATGANATTG CAATCCCTGA TGCTGCATCT CGGCCTTCGT 
TTGAATGTNA ANCTTGTTTC TATNGGGGCN GGTTCAAACC CATATNAATT 
CCA

5 prime edge [+] show sequence

Chromosome: 2; Position: 278378 [Map]; Strand: c
- AT2G01620.1 - [+] show detail - RNI-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

TTTTTCNANA TCAAATTGGA TTGATCTNGG NCAGAAGTCA NCGGTTAGAC 
GATAGCTTAN CGGTGGTTCA ATAACGAATT TTGTCCATTA CGCGATTTCG 
TCTCTGATCN CGTCTCTGAN ANATCGCGAA ACGCGAGTCA TANAGAGAAG 
CTCGAACAGA GAATGAAGAT AAGGAAGAAC GATTAATAAA ACCTCGTGAA 
CGGATCTCCA TTCTTCTTCT NCTTCTTCTT CAAGCTCCGT CTTCATATTC 
TCAGCTTCTG AATTTGNTCT CTTTTANTTT TTCTTATCCT TTGTCNTTGA 
TCAGATGAAT CAATGCCACT CGCATTATCT TACGAANAAG CCAAATGTTT 
GANTNTTTTG ACTCGTCNAA AGCTATTTGG GCTGCCTTGC TTTGAGCCCA 
AATTCCCTTG TGGATTATAA CACGTTGGGC CTAAAGCCCN TACNTNAATT 
CTGTAAANTG AAGAATGACA ATAACTACAA ATGATGCATG TTTTTTTACT 
CATAGATTTA AATCCTTCTA TTTTTCACTT TCAAATCCNT TTATAATAAT 
TTATTGGTTC ATGGATTTAA TTGATTTAAC NTTCCAAAGT AAAATTTATG 
TTATTCNATC TATTATTTAA TATTAAAAAA TTGTNATCNT TTGTTATTTT 
NTCTTTTTTT TGTCNTCAGA ATTTATNCTT TNTNTTNGGG GGNCNACCAN 
CCCNCNNAAT TTTNCCCCCC CCCGNGGATT TTAAT

AT2G01620.1

Model type: Protein coding
Short Description: RNI-like superfamily protein
Computational Description: maternal effect embryo arrest 11 (MEE11); BEST Arabidopsis thaliana protein match is: Ribonuclease inhibitor (TAIR:AT3G26000.1); Has 234 Blast hits to 230 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 2; Plants - 81; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link: InterPro Scan - TAIR