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Mutant Lines
GT11712

GT11712

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT11712

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 13160992 [Map]; Strand: c
- AT4G25890.1 - [+] show detail - 60S acidic ribosomal protein family
  Distance: -497; Region: promoter
- AT4G25900.1 - [+] show detail - Galactose mutarotase-like superfamily protein
  Distance: -354; Region: promoter

GGATTAAAGA TTATGGATGA TTTTGTGGAA TTTAGGAAAT TTTAGATTTT 
GAGAGATTTG AGTCAGTTTT TAGGATATGT GGTGGAATTG GTAGATGTTT 
TGTTTTAAAA GTAGAAAATT AGTTTGTGAT TTGGTGACAT AAAGATGACA 
TGAGTACAGT ATAATTTTGT TAAAATATAA ACCAATAGAA AACCAATTTA 
CTATGTGAGT TCTTTTACTT CAATGGTGAT TTCATGGCTT AGACTTAAGA 
GTTACAATAT CATGTGGTGA ATGGTGCGAT GCATAGTTTA TGGAAAAACA 
TAGTTGAGAG TTGTGATACT CTAATAATCT CATCATCTCA TGTGTTAGGA 
AATGACTCTC GTAGAATCTG ATAAATTTTG TTGATCTTTG CTTTTTTGGT 
TTTTCAAAGA AGTGAAAGAA CCTTGGTGGG TTGTTGCTAT TCACTCTAGG 
GCTATATATA T

AT4G25890.1

Model type: Protein coding
Short Description: 60S acidic ribosomal protein family
Computational Description: 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G57290.3); Has 643 Blast hits to 642 proteins in 155 species: Archae - 0; Bacteria - 8; Metazoa - 276; Fungi - 74; Plants - 217; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G25900.1

Model type: Protein coding
Short Description: Galactose mutarotase-like superfamily protein
Computational Description: Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR